RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ANXA11P50995 505 aaKnown RBP12.71□□□□□ -0.37
USP38-201ENST00000307017 WDR59Q6PJI9 974 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 DTX3Q8N9I9 347 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 FNIP1Q8TF40 1166 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 LPAR1Q92633 364 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 ING3Q9NXR8 418 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.37
USP38-201ENST00000307017 MAP4K5Q9Y4K4 846 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 SERPINA3P01011 423 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 RRP1BQ14684 758 aaKnown RBP12.71□□□□□ -0.37
USP38-201ENST00000307017 PMF1Q6P1K2 205 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 RNF180Q86T96 592 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 FAM47BQ8NA70 645 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 ACTRT2Q8TDY3 377 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 STN1Q9H668 368 aaKnown RBP12.71□□□□□ -0.37
USP38-201ENST00000307017 KCND2Q9NZV8 630 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 SLC17A6Q9P2U8 582 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 LOC100509620A0A075B734 347 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 ZSCAN5BA6NJL1 495 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 CASKO14936 926 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
USP38-201ENST00000307017 NADKO95544 446 aaPredicted RBP12.71□□□□□ -0.37
USP38-201ENST00000307017 GLRA2P23416 452 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 MTTPP55157 894 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 TAS2R40P59535 323 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 ST3GAL1Q11201 340 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 GRB14Q14449 540 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 ZNF615Q8N8J6 731 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 TBCBQ99426 244 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 RIT2Q99578 217 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 CNPPD1Q9BV87 410 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 PPCSQ9HAB8 311 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 NTSR2O95665 410 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 ALDH2P05091 517 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 ITGB1P05556 798 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 ARL3P36405 182 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 PPP3CAQ08209 521 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 MZT2BQ6NZ67 158 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 PHF10Q8WUB8 498 aaKnown RBP12.71□□□□□ -0.38
USP38-201ENST00000307017 JSRP1Q96MG2 331 aaPredicted RBP12.71□□□□□ -0.38
USP38-201ENST00000307017 MCMBPQ9BTE3 642 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 INTS7Q9NVH2 962 aaKnown RBP12.71□□□□□ -0.38
USP38-201ENST00000307017 MDM4O15151 490 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 MSI1O43347 362 aaKnown RBP12.71□□□□□ -0.38
USP38-201ENST00000307017 CDC40O60508 579 aaKnown RBP eCLIP12.71□□□□□ -0.38
USP38-201ENST00000307017 PNPLA4P41247 253 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 KCT2Q8NC54 265 aa12.71□□□□□ -0.38
USP38-201ENST00000307017 A0A087WXM4 84 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ADRB2P07550 413 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 IGFBP4P22692 258 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 IL2P60568 153 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 BST1Q10588 318 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 IL17AQ16552 155 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 BROXQ5VW32 411 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ABRAXAS1Q6UWZ7 409 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ADGRG6Q86SQ4 1221 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ATXN2LQ8WWM7 1075 aaKnown RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 GTPBP3Q969Y2 492 aaKnown RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 TDRD1Q9BXT4 1180 aaKnown RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 ADGRE2Q9UHX3 823 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 KDM6AO15550 1401 aaPredicted RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 KCNU1A8MYU2 1149 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 KIAA0391O15091 583 aaKnown RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 RASGRP1O95267 797 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 CCNYL3P0C7X3 344 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 CRABP2P29373 138 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 HSF2Q03933 536 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 SPIRE1Q08AE8 756 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 TMEM132BQ14DG7 1078 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 PPM1MQ96MI6 270 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ZNF395Q9H8N7 513 aaPredicted RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 DPPA5A6NC42 116 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 hCG_2039718K7EN88 272 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 AUHQ13825 339 aaKnown RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 OTOP3Q7RTS5 596 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 DHDDSQ86SQ9 333 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 FOXP3Q9BZS1 431 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 IL1R1P14778 569 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 GRSF1Q12849 480 aaKnown RBP eCLIP12.7□□□□□ -0.38
USP38-201ENST00000307017 DENND5AQ6IQ26 1287 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 BHLHB9Q6PI77 547 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 FAM220AQ7Z4H9 259 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 SYNPOQ8N3V7 929 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 C1GALT1C1Q96EU7 318 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 STOML2Q9UJZ1 356 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 MTF2Q9Y483 593 aaPredicted RBP12.7□□□□□ -0.38
USP38-201ENST00000307017 CEP170Q5SW79 1584 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 PACS1Q6VY07 963 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ZNF280BQ86YH2 543 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 ESAMQ96AP7 390 aa12.7□□□□□ -0.38
USP38-201ENST00000307017 FUCA2Q9BTY2 467 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms