RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 RPL17P18621 184 aaKnown RBP18.79■□□□□ 0.6
RNF139-201ENST00000303545 FSCBQ5H9T9 825 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 MAP3K21Q5TCX8 1036 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 NADSYN1Q6IA69 706 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 FUBP3Q96I24 572 aaKnown RBP eCLIP18.79■□□□□ 0.6
RNF139-201ENST00000303545 BTN2A3PQ96KV6 586 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 SEMA3CQ99985 751 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 TNFRSF12AQ9NP84 129 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 IGSF5Q9NSI5 407 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 ARL5AQ9Y689 179 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 FNDC1Q4ZHG4 1894 aaPredicted RBP18.79■□□□□ 0.6
RNF139-201ENST00000303545 A0A0D9SEW6 157 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 MTMR11A4FU01 709 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 RAMP2O60895 175 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 GLDCP23378 1020 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 PIK3R1P27986 724 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 SLC11A1P49279 550 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 NUDT2P50583 147 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 NDST2P52849 883 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 ATXN3P54252 364 aaPredicted RBP18.79■□□□□ 0.6
RNF139-201ENST00000303545 EXT2Q93063 718 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 MRPL46Q9H2W6 279 aaKnown RBP18.79■□□□□ 0.6
RNF139-201ENST00000303545 MID2Q9UJV3 735 aa18.79■□□□□ 0.6
RNF139-201ENST00000303545 WASH4PA8MWX3 477 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 F8W8V4 182 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 H2AFYO75367 372 aaKnown RBP18.78■□□□□ 0.6
RNF139-201ENST00000303545 PRSS56P0CW18 603 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 CRABP2P29373 138 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 FAM189BP81408 668 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 TCTN1Q2MV58 587 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 TRIM67Q6ZTA4 783 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 SNX31Q8N9S9 440 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 RDH11Q8TC12 318 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 GPAMQ9HCL2 828 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 SCAMP3O14828 347 aaKnown RBP18.78■□□□□ 0.6
RNF139-201ENST00000303545 NBNO60934 754 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 MYL4P12829 197 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 PSEN1P49768 467 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 CDKN2DP55273 166 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 CCNIQ14094 377 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 TRIP4Q15650 581 aaPredicted RBP18.78■□□□□ 0.6
RNF139-201ENST00000303545 RNF148Q8N7C7 305 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 ARRDC2Q8TBH0 407 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 EXOC2Q96KP1 924 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 TBATAQ96M53 351 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 SMIM14Q96QK8 99 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 TLR8Q9NR97 1041 aaKnown RBP18.78■□□□□ 0.6
RNF139-201ENST00000303545 MARCH5Q9NX47 278 aa18.78■□□□□ 0.6
RNF139-201ENST00000303545 GREB1Q4ZG55 1949 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 PLXNA3P51805 1871 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 CFLARO15519 480 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 MAP3K7O43318 606 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 TLR5O60602 858 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 MT-CO1P00395 513 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 AP2B1P63010 937 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 PRAMEP78395 509 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 NRG1Q02297 640 aaPredicted RBP18.77■□□□□ 0.6
RNF139-201ENST00000303545 PRKAA1Q13131 559 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 LGI2Q8N0V4 545 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
RNF139-201ENST00000303545 PTCD2Q8WV60 388 aaKnown RBP18.77■□□□□ 0.6
RNF139-201ENST00000303545 MRM3Q9HC36 420 aaKnown RBP18.77■□□□□ 0.6
RNF139-201ENST00000303545 PCDHB7Q9Y5E2 793 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 ADAM12O43184 909 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 PAX3P23760 479 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 MSLNQ13421 630 aaPredicted RBP18.77■□□□□ 0.6
RNF139-201ENST00000303545 LBRQ14739 615 aaKnown RBP18.77■□□□□ 0.6
RNF139-201ENST00000303545 GPR158Q5T848 1215 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 HECTD2Q5U5R9 776 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 TMEM207Q6UWW9 146 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 ARHGAP18Q8N392 663 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 PPFIBP2Q8ND30 876 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 OR52K2Q8NGK3 314 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 RAET1EQ8TD07 263 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 PRKD2Q9BZL6 878 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 NDE1Q9NXR1 346 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 ZNF212Q9UDV6 495 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 ANGPTL2Q9UKU9 493 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 ARHGAP26Q9UNA1 814 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 CDYLQ9Y232 598 aa18.77■□□□□ 0.6
RNF139-201ENST00000303545 TMEM189-UBE2V1I3L0A0 370 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 ENPP3O14638 875 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 ACADSP16219 412 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 POU4F1Q01851 419 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 ASPHQ12797 758 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 RNF111Q6ZNA4 994 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 ACAD11Q709F0 780 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 LRRC8DQ7L1W4 858 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 CILP2Q8IUL8 1156 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 OR7D4Q8NG98 312 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 OR13C4Q8NGS5 318 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 ACTRT2Q8TDY3 377 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 USP13Q92995 863 aaPredicted RBP18.76■□□□□ 0.59
RNF139-201ENST00000303545 MIEF2Q96C03 454 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 DNAJC1Q96KC8 554 aaKnown RBP18.76■□□□□ 0.59
RNF139-201ENST00000303545 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 ATP13A1Q9HD20 1204 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 POMPQ9Y244 141 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 SYN3O14994 580 aa18.76■□□□□ 0.59
RNF139-201ENST00000303545 TRPA1O75762 1119 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms