RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MRPL17Q9NRX2 175 aaKnown RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 GMPPBQ9Y5P6 360 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 SGTAO43765 313 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 ATP6V1C1P21283 382 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 GSTM5P46439 218 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 MARK2Q7KZI7 788 aaKnown RBP14.02□□□□□ -0.16
PRKCB-201ENST00000303531 AMIGO2Q86SJ2 522 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 DIABLOQ9NR28 239 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 TMPRSS4Q9NRS4 437 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 ZNF624Q9P2J8 865 aaPredicted RBP14.02□□□□□ -0.16
PRKCB-201ENST00000303531 TBL1XO60907 577 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 NAA20P61599 178 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 BNIP2Q12982 314 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 INSCQ1MX18 579 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 SDHAF4Q5VUM1 108 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 C12orf56Q8IXR9 622 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 IQCKQ8N0W5 287 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 PSEN1P49768 467 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 PTSQ03393 145 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 GNA13Q14344 377 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 HLA-DQA1Q5Y7H0 255 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 DUSP16Q9BY84 665 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 ARHGEF3Q9NR81 526 aa14.02□□□□□ -0.16
PRKCB-201ENST00000303531 PRR5-ARHGAP8B1AHC4 643 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 GUCY1B2O75343 617 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 EPORP19235 508 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 ARHGAP8P85298 464 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 ATL1Q8WXF7 558 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 HDAC10Q969S8 669 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 ATP13A3Q9H7F0 1226 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 PCDH12Q9NPG4 1184 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 EHD3Q9NZN3 535 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 C3orf18Q9UK00 162 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 LYVE1Q9Y5Y7 322 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 SF3B1O75533 1304 aaKnown RBP eCLIP14.02□□□□□ -0.173e-6■■■■■ 63.8
PRKCB-201ENST00000303531 AZIN1O14977 448 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 ADSSP30520 456 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 GRM5P41594 1212 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 HELQQ8TDG4 1101 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 R3HDM2Q9Y2K5 976 aaKnown RBP14.02□□□□□ -0.17
PRKCB-201ENST00000303531 SAPCD2Q86UD0 394 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 CLIC5Q9NZA1 410 aa14.02□□□□□ -0.17
PRKCB-201ENST00000303531 SLC28A1O00337 649 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 IL6P05231 212 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 IL12RB1P42701 662 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 NR1H2P55055 460 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 ZSWIM7Q19AV6 140 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 PTPN20Q4JDL3 420 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 COMMD2Q86X83 199 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 NDOR1Q9UHB4 597 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 SLC27A5Q9Y2P5 690 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 OTCP00480 354 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 USP46P62068 366 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 FOLH1Q04609 750 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 HGSNATQ68CP4 663 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 APTXQ7Z2E3 356 aaKnown RBP14.01□□□□□ -0.17
PRKCB-201ENST00000303531 CROCCP3Q8IVE0 287 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 SUSD6Q92537 303 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 PTCH2Q9Y6C5 1203 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 SNAP91O60641 907 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 BPGMP07738 259 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 FGRP09769 529 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 CCR4P51679 360 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 POM121L1PQ3SYA9 428 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 LRRC52Q8N7C0 313 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 SLITRK2Q9H156 845 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 RHBGQ9H310 441 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 PDE9AO76083 593 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 CST1P01037 141 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 PRKG2Q13237 762 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 TXNDC11Q6PKC3 985 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 NELL1Q92832 810 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 PPP1R14AQ96A00 147 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 LHX5Q9H2C1 402 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 FANCEQ9HB96 536 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 ARL8BQ9NVJ2 186 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 MAPK8P45983 427 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 HIRAP54198 1017 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-201ENST00000303531 CNSTQ6PJW8 725 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 ADAMTSL2Q86TH1 951 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 FAM35AQ86V20 835 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 OR4L1Q8NH43 312 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 UBE2E3Q969T4 207 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 PPP1R16AQ96I34 528 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 TRIM8Q9BZR9 551 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 POLR1BQ9H9Y6 1135 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 HMX1Q9NP08 348 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-201ENST00000303531 IKZF3Q9UKT9 509 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 DHRS12A0PJE2 317 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 OR6B1O95007 311 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 HDCP19113 662 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 RPL5P46777 297 aaKnown RBP14.01□□□□□ -0.17
PRKCB-201ENST00000303531 NOMO1Q15155 1222 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 A0A088AWK7 358 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 SNPHO15079 494 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 ZNF10P21506 573 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-201ENST00000303531 LSM3P62310 102 aaKnown RBP14.01□□□□□ -0.17
PRKCB-201ENST00000303531 SLC25A52Q3SY17 297 aa14.01□□□□□ -0.17
PRKCB-201ENST00000303531 ZNF557Q8N988 423 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms