RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 GNRH1P01148 92 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 MBL2P11226 248 aaPredicted RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 CSF2RAP15509 400 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 HMGA1P17096 107 aaKnown RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 ITGB8P26012 769 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 EPHA3P29320 983 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 SLC12A1Q13621 1099 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 INSCQ1MX18 579 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 ICE2Q659A1 982 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 CLEC14AQ86T13 490 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 RBM15BQ8NDT2 890 aaKnown RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 FAM161BQ96MY7 647 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 BPIFA1Q9NP55 256 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 SAR1AQ9NR31 198 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 YIPF1Q9Y548 306 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 GSC2O15499 205 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 STC2O76061 302 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 IGLV3-27P01718 113 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 RHOCP08134 193 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 PDHA1P08559 390 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 MAGEA12P43365 314 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 TUFMP49411 452 aaKnown RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 SLC25A3Q00325 362 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 CDK18Q07002 472 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 ARL13AQ5H913 290 aaPredicted RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 LRRC8EQ6NSJ5 796 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 PHTF2Q8N3S3 785 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 ARL14EPQ8N8R7 260 aaPredicted RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 OR52B2Q96RD2 323 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 NUDCD1Q96RS6 583 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 THTPAQ9BU02 230 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 C1QTNF1Q9BXJ1 281 aa14.68□□□□□ -0.06
SMG8-201ENST00000300917 PAK6Q9NQU5 681 aaPredicted RBP14.68□□□□□ -0.06
SMG8-201ENST00000300917 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.68□□□□□ -0.06
SMG8-201ENST00000300917 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 DRGXA6NNA5 263 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 DLX3O60479 287 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 JUNP05412 331 aaKnown RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 CCDC166P0CW27 439 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 CALB2P22676 271 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 SLC8A1P32418 973 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 ELF1P32519 619 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 OXCT1P55809 520 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 NRG1Q02297 640 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 IL10RBQ08334 325 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 KPNB1Q14974 876 aaKnown RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 TMCO4Q5TGY1 634 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 RNF219Q5W0B1 726 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 SLC8B1Q6J4K2 584 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 INPP5DQ92835 1189 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 CINPQ9BW66 212 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 GPAMQ9HCL2 828 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 AP3B1O00203 1094 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 GPR39O43194 453 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 BNIP3LO60238 219 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 PRAMEF11O60813 436 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 ATXN1LP0C7T5 689 aaKnown RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 ZDHHC11BP0C7U3 371 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 KCNA5P22460 613 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 GRK2P25098 689 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 HOXD9P28356 352 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 PGM1P36871 562 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 SMAD3P84022 425 aaKnown RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 UGP2Q16851 508 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 PARP15Q460N3 678 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 FSCBQ5H9T9 825 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 SPDYAQ5MJ70 313 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 ZNF461Q8TAF7 563 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 ANKRD49Q8WVL7 239 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 WDR60Q8WVS4 1066 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 TMEM175Q9BSA9 504 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 FAM96AQ9H5X1 160 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 AGO1Q9UL18 857 aaKnown RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 ZNF189O75820 626 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 ZNF177Q13360 481 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 TMEM198Q66K66 360 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 KIAA0930Q6ICG6 404 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 TMC7Q7Z402 723 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 C2CD4AQ8NCU7 369 aaPredicted RBP14.67□□□□□ -0.06
SMG8-201ENST00000300917 LPCAT1Q8NF37 534 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 GTSE1Q9NYZ3 720 aa14.67□□□□□ -0.06
SMG8-201ENST00000300917 SIN3BO75182 1162 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 SKAP2O75563 359 aaPredicted RBP14.66□□□□□ -0.06
SMG8-201ENST00000300917 SERPINF2P08697 491 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 MZF1P28698 734 aaPredicted RBP14.66□□□□□ -0.06
SMG8-201ENST00000300917 SERPINB5P36952 375 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 CYP4F8P98187 520 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 GPR158Q5T848 1215 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 EP400NLQ6ZTU2 488 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 DNAJB7Q7Z6W7 309 aaPredicted RBP14.66□□□□□ -0.06
SMG8-201ENST00000300917 LRRC49Q8IUZ0 686 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 MCMBPQ9BTE3 642 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 CFHR5Q9BXR6 569 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 TM6SF2Q9BZW4 377 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 SMG9Q9H0W8 520 aaKnown RBP14.66□□□□□ -0.06
SMG8-201ENST00000300917 OXSMQ9NWU1 459 aa14.66□□□□□ -0.06
SMG8-201ENST00000300917 UBA2Q9UBT2 640 aaPredicted RBP14.66□□□□□ -0.06
SMG8-201ENST00000300917 ZDHHC2Q9UIJ5 367 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms