RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 NOD2Q9HC29 1040 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 APOBEC3BQ9UH17 382 aaKnown RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 STOML2Q9UJZ1 356 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 TRIM38O00635 465 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 MFSD11O43934 449 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 PDHA1P08559 390 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 CEACAM1P13688 526 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 AK4P27144 223 aaPredicted RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 SERPINA4P29622 427 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 GRK6P43250 576 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 CCDC173Q0VFZ6 552 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 FGL2Q14314 439 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 CYTH1Q15438 398 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 UGP2Q16851 508 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 ZNF805Q5CZA5 627 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 C3orf38Q5JPI3 329 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 PIP5KL1Q5T9C9 394 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 ERAP2Q6P179 960 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 SCML4Q8N228 414 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 PCDH20Q8N6Y1 951 aaKnown RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 CCL4L1Q8NHW4 92 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 CSPG4P5Q96PW8 444 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 FUCA2Q9BTY2 467 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 SLC13A1Q9BZW2 595 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 IP6K2Q9UHH9 426 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 ZNHIT2Q9UHR6 403 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 TSR3Q9UJK0 312 aaKnown RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 CAPN11Q9UMQ6 739 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 RAXQ9Y2V3 346 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 OR51B4Q9Y5P0 310 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 TLN1Q9Y490 2541 aaKnown RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 SVILO95425 2214 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 BUB1BO60566 1050 aaPredicted RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 LRP3O75074 770 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 RECQL5O94762 991 aaPredicted RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 PBLDP30039 288 aaPredicted RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 EIF2S3P41091 472 aaKnown RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 ETV3P41162 512 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 TMPRSS15P98073 1019 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 NOMO1Q15155 1222 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 PLA2G4EQ3MJ16 856 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 NAPEPLDQ6IQ20 393 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 AADACL2Q6P093 401 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 UNQ6494/PRO21346Q6UXR6 183 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 PLA2G15Q8NCC3 412 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 CADM4Q8NFZ8 388 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 CARS2Q9HA77 564 aaKnown RBP5.7□□□□□ -1.5
PATL1-201ENST00000300146 PCDH18Q9HCL0 1135 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 B4GALT6Q9UBX8 382 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 ZMIZ1Q9ULJ6 1067 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 HS3ST2Q9Y278 367 aa5.7□□□□□ -1.5
PATL1-201ENST00000300146 EIF4E1BA6NMX2 242 aaKnown RBP5.69□□□□□ -1.5
PATL1-201ENST00000300146 DRGXA6NNA5 263 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 PRAMEF26H0Y7S4 382 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 IFNB1P01574 187 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 HGFP14210 728 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 TIMP2P16035 220 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 TSHRP16473 764 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 MMP13P45452 471 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 PPARDQ03181 441 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 ZBTB16Q05516 673 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 SERINC3Q13530 473 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 LBRQ14739 615 aaKnown RBP5.69□□□□□ -1.5
PATL1-201ENST00000300146 LRRC14Q15048 493 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 BOLA3Q53S33 107 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 HGSNATQ68CP4 663 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 KCTD16Q68DU8 428 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 PLEKHA7Q6IQ23 1121 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 SPATS2Q86XZ4 545 aaKnown RBP5.69□□□□□ -1.5
PATL1-201ENST00000300146 MAP7D3Q8IWC1 876 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 SDR16C5Q8N3Y7 309 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.69□□□□□ -1.5
PATL1-201ENST00000300146 SPATA22Q8NHS9 363 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 PATE1Q8WXA2 126 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 PRR11Q96HE9 360 aaPredicted RBP5.69□□□□□ -1.5
PATL1-201ENST00000300146 ATP13A3Q9H7F0 1226 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 CD248Q9HCU0 757 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 TMEM248Q9NWD8 314 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 AIPL1Q9NZN9 384 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 ATXN7L1Q9ULK2 861 aaPredicted RBP5.69□□□□□ -1.5
PATL1-201ENST00000300146 GUCA1BQ9UMX6 200 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 SPTBP11277 2137 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 A0A0U1RQJ8 604 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 PYCARD-AS1I3L0S3 204 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 K7ESM1 405 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 KDELR3O43731 214 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 ZMPSTE24O75844 475 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 FTCDO95954 541 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 CD160O95971 181 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 ANXA6P08133 673 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 C6P13671 934 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 DGKAP23743 735 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 CD86P42081 329 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 GNPDA1P46926 289 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 RPL34P49207 117 aaKnown RBP5.69□□□□□ -1.5
PATL1-201ENST00000300146 RPS21P63220 83 aaKnown RBP5.69□□□□□ -1.5
PATL1-201ENST00000300146 HES3Q5TGS1 186 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 CCDC70Q6NSX1 233 aa5.69□□□□□ -1.5
PATL1-201ENST00000300146 CRTC3Q6UUV7 619 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms