RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PAGE1O75459 146 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 LATS1O95835 1130 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 GOT1P17174 413 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 OTUD4Q01804 1114 aaKnown RBP21.37■■□□□ 1.01
SMCO4-201ENST00000298966 ADCY2Q08462 1091 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 DNAJC3Q13217 504 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 CUL1Q13616 776 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 DPYSQ14117 519 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 PAFAH1B3Q15102 231 aaKnown RBP21.37■■□□□ 1.01
SMCO4-201ENST00000298966 HES3Q5TGS1 186 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 ZNF776Q68DI1 518 aaPredicted RBP21.37■■□□□ 1.01
SMCO4-201ENST00000298966 TTC27Q6P3X3 843 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 TMCO3Q6UWJ1 677 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 JAMLQ86YT9 394 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 PLD5Q8N7P1 536 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 SNIP1Q8TAD8 396 aaKnown RBP21.37■■□□□ 1.01
SMCO4-201ENST00000298966 GANCQ8TET4 914 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 FERMT1Q9BQL6 677 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 ORAI3Q9BRQ5 295 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 CATSPERBQ9H7T0 1116 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 FAM114A2Q9NRY5 505 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 DOCK4Q8N1I0 1966 aa21.37■■□□□ 1.01
SMCO4-201ENST00000298966 NAV2Q8IVL1 2488 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 CAPN8A6NHC0 703 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 TTI1O43156 1089 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 MSI1O43347 362 aaKnown RBP21.36■■□□□ 1.01
SMCO4-201ENST00000298966 CREB3O43889 395 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 IGHV4-34P06331 123 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 HOXD9P28356 352 aaPredicted RBP21.36■■□□□ 1.01
SMCO4-201ENST00000298966 HLA-FP30511 346 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 STIP1P31948 543 aaKnown RBP21.36■■□□□ 1.01
SMCO4-201ENST00000298966 GUCY2DQ02846 1103 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 LLGL1Q15334 1064 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 OASLQ15646 514 aaKnown RBP21.36■■□□□ 1.01
SMCO4-201ENST00000298966 PRAMEF14Q5SWL7 426 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 LRRC31Q6UY01 552 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 LZTR1Q8N653 840 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 CCDC89Q8N998 374 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 TBC1D31Q96DN5 1066 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 SLC6A18Q96N87 628 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 DDX50Q9BQ39 737 aaKnown RBP21.36■■□□□ 1.01
SMCO4-201ENST00000298966 ERP44Q9BS26 406 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 BRD8Q9H0E9 1235 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 EPB41L5Q9HCM4 733 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 ARFGAP3Q9NP61 516 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 SUN2Q9UH99 717 aa21.36■■□□□ 1.01
SMCO4-201ENST00000298966 R3HDM2Q9Y2K5 976 aaKnown RBP21.36■■□□□ 1.01
SMCO4-201ENST00000298966 A0A1W2PPC4 97 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 FAM47DPA6NHR8 397 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 HACD1B0YJ81 288 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 YKT6O15498 198 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 HARS2P49590 506 aaKnown RBP21.35■■□□□ 1.01
SMCO4-201ENST00000298966 ACADVLP49748 655 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 EIF3EP60228 445 aaKnown RBP21.35■■□□□ 1.01
SMCO4-201ENST00000298966 DYNLT1P63172 113 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 CFHR1Q03591 330 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 PPP1R7Q15435 360 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 MANEALQ5VSG8 457 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 CDKL3Q8IVW4 592 aaPredicted RBP21.35■■□□□ 1.01
SMCO4-201ENST00000298966 AHI1Q8N157 1196 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 PYROXD2Q8N2H3 581 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 ATG4AQ8WYN0 398 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 FGF11Q92914 225 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 CCDC114Q96M63 670 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 ANLNQ9NQW6 1124 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 ABCB8Q9NUT2 735 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 PPARGC1AQ9UBK2 798 aaKnown RBP21.35■■□□□ 1.01
SMCO4-201ENST00000298966 DNPEPQ9ULA0 475 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 SCML1Q9UN30 329 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 ZNF148Q9UQR1 794 aa21.35■■□□□ 1.01
SMCO4-201ENST00000298966 I6L893 689 aaPredicted RBP21.34■■□□□ 1.01
SMCO4-201ENST00000298966 J3QKU1 62 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 LRIG2O94898 1065 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 ATP5BP06576 529 aaKnown RBP21.34■■□□□ 1.01
SMCO4-201ENST00000298966 PABPC1P11940 636 aaKnown RBP21.34■■□□□ 1.01
SMCO4-201ENST00000298966 SLC11A2P49281 568 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 MRPS25P82663 173 aaKnown RBP21.34■■□□□ 1.01
SMCO4-201ENST00000298966 SFSWAPQ12872 951 aaKnown RBP21.34■■□□□ 1.01
SMCO4-201ENST00000298966 PTK6Q13882 451 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 NCBP2-AS2Q69YL0 99 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 FBXL19Q6PCT2 694 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 C4orf22Q6V702 233 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 USP30Q70CQ3 517 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 ADIPOR2Q86V24 386 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 EID2Q8N6I1 236 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.34■■□□□ 1.012e-6■■■□□ 17.7
SMCO4-201ENST00000298966 BBOF1Q8ND07 529 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 SAP25Q8TEE9 199 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 AASDHPPTQ9NRN7 309 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 GGA2Q9UJY4 613 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 COL6A6A6NMZ7 2263 aa21.34■■□□□ 1.01
SMCO4-201ENST00000298966 WASH4PA8MWX3 477 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 PPP1R12AO14974 1030 aaPredicted RBP21.33■■□□□ 1.01
SMCO4-201ENST00000298966 DLDP09622 509 aaKnown RBP21.33■■□□□ 1.01
SMCO4-201ENST00000298966 RBP3P10745 1247 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 ERCC2P18074 760 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 MX2P20592 715 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 AMPD1P23109 780 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 EPHB2P29323 1055 aa21.33■■□□□ 1.01
SMCO4-201ENST00000298966 ACTN2P35609 894 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms