RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 A0A088AWK7 358 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 G3V2T6 193 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 AKAP8O43823 692 aaKnown RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 LDOC1O95751 146 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 EPORP19235 508 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF10P21506 573 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ZBTB6Q15916 424 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ALG11Q2TAA5 492 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 DHDDSQ86SQ9 333 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 GJD3Q8N144 294 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 DEPDC4Q8N2C3 294 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 OR4A15Q8NGL6 344 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 DNAJB14Q8TBM8 379 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 TEX47Q8TBZ9 253 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 CLIP3Q96DZ5 547 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PGLYRP2Q96PD5 576 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ABCG8Q9H221 673 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 ETNK2Q9NVF9 386 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 PLK2Q9NYY3 685 aa5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MTF2Q9Y483 593 aaPredicted RBP5.6□□□□□ -1.51
CPSF2-201ENST00000298875 MCIDASD6RGH6 385 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 LOC110117498-PIK3R3F6TDL0 507 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 TFECO14948 347 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 SLC25A12O75746 678 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 AKAP3O75969 853 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 APOC1P02654 83 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 C9P02748 559 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF806P0C7X5 589 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ARHGDIBP52566 201 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 CAMK1Q14012 370 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 CCDC58Q4VC31 144 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 GRIN3AQ8TCU5 1115 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 NEK7Q8TDX7 302 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 PIK3R3Q92569 461 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 GSDMCQ9BYG8 508 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF304Q9HCX3 659 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 BTRCQ9Y297 605 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 DHRS7Q9Y394 339 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 MST1RQ04912 1400 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 LRATO95237 230 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 CYP1A1P04798 512 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 USP17L7P0C7H9 530 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 S100GP29377 79 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 TUFMP49411 452 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 MARSP56192 900 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 USP46P62068 366 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 PPATQ06203 517 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 AP5B1Q2VPB7 878 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 FAM171BQ6P995 826 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 FAM131AQ6UXB0 335 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 KYAT3Q6YP21 454 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 DEFB128Q7Z7B8 93 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 FAM129BQ96TA1 746 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 MTG1Q9BT17 334 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 TDRD1Q9BXT4 1180 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 LACRTQ9GZZ8 138 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ATXN3LQ9H3M9 355 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 THG1LQ9NWX6 298 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 VPS51Q9UID3 782 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ENTPD3O75355 529 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ARF4P18085 180 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 DGKAP23743 735 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 BNIP2Q12982 314 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 IL18Q14116 193 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 IPCEF1Q8WWN9 437 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ZMYM2Q9UBW7 1377 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 PLK4O00444 970 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 FADS2O95864 444 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 C3P01024 1663 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 FSTL1Q12841 308 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 C16orf46Q6P387 395 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 GALNT18Q6P9A2 607 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 TPGS1Q6ZTW0 290 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 RAB43Q86YS6 212 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ZDHHC17Q8IUH5 632 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 FUKQ8N0W3 1084 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 FBXW8Q8N3Y1 598 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ZFAND2BQ8WV99 257 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 RAD51AP1Q96B01 352 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ELL3Q9HB65 397 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 DMGDHQ9UI17 866 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 UMODL1Q5DID0 1318 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 HOXA2O43364 376 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 OR10H2O60403 315 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 CSDE1O75534 798 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 BUD31P41223 144 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 TRIM28Q13263 835 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 INSCQ1MX18 579 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 DEF8Q6ZN54 512 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ALYREFQ86V81 257 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 CITED4Q96RK1 184 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ZFP14Q9HCL3 533 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 GPN1Q9HCN4 374 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 SNTG2Q9NY99 539 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 SAE1Q9UBE0 346 aaPredicted RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 SMCO3A2RU48 225 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 HAT1O14929 419 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 TMCC2O75069 709 aa5.59□□□□□ -1.51
CPSF2-201ENST00000298875 RBMXL2O75526 392 aaKnown RBP5.59□□□□□ -1.51
CPSF2-201ENST00000298875 ZNF432O94892 652 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms