RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 TMEM164Q5U3C3 297 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 ESRP1Q6NXG1 681 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 C17orf64Q86WR6 236 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 DENND6AQ8IWF6 608 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 ZNF563Q8TA94 476 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 FBXO25Q8TCJ0 367 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 MTERF3Q96E29 417 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 APOPT1Q96IL0 206 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 LMLNQ96KR4 655 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 RNF157Q96PX1 679 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 PDZD7Q9H5P4 517 aa6.96□□□□□ -1.29
GAPVD1-202ENST00000297933 CAMTA1Q9Y6Y1 1673 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 GLYATL1P3A0A0U1RQE8 302 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 TPP1O14773 563 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 FAM20BO75063 409 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 MLYCDO95822 493 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 NR2F1P10589 423 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 PSMC3P17980 439 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 SSTR1P30872 391 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 MAT2AP31153 395 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 RFC2P35250 354 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 RPL4P36578 427 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 SARSP49591 514 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 NAA20P61599 178 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 IL5RAQ01344 420 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 MTAPQ13126 283 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 KAT5Q92993 513 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 GFM2Q969S9 779 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 LRRC39Q96DD0 335 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 UGT2B28Q9BY64 529 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 AGXT2Q9BYV1 514 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 TNKS2Q9H2K2 1166 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 CCT8L1PA6NM43 557 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 FAM25AB3EWG3 89 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 FAM25CB3EWG5 89 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 FAM25GB3EWG6 89 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 FFAR3O14843 346 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 GPR42O15529 346 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ERCC2P18074 760 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 LBPP18428 481 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ITPKBP27987 946 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 CMPK1P30085 196 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 CCND3P30281 292 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 RPL21P46778 160 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 NEK3P51956 506 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 RASA2Q15283 850 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 SLC25A52Q3SY17 297 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 IRGCQ6NXR0 463 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 UBE2R2Q712K3 238 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 PTGR2Q8N8N7 351 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 HMGB4Q8WW32 186 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 KLHL5Q96PQ7 755 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 NDNQ99608 321 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ACAT2Q9BWD1 397 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ROGDIQ9GZN7 287 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 CYLDQ9NQC7 956 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 KLHL1Q9NR64 748 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 VPS4AQ9UN37 437 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 AP3M1Q9Y2T2 418 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 SLC45A1Q9Y2W3 748 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 SOWAHBA6NEL2 793 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 PEX1O43933 1283 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 KRT75O95678 551 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 CAPN1P07384 714 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 TFPIP10646 304 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ETS1P14921 441 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 CDK16Q00536 496 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 FAM220AQ7Z4H9 259 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ADAMTSL2Q86TH1 951 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 HID1Q8IV36 788 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 SCUBE1Q8IWY4 988 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ETNPPLQ8TBG4 499 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ZNF398Q8TD17 642 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 EPS8L1Q8TE68 723 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ASZ1Q8WWH4 475 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 BRI3BPQ8WY22 251 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 IRGQQ8WZA9 623 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 RNFT2Q96EX2 444 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 DUSP9Q99956 384 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ACBD6Q9BR61 282 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ARHGAP9Q9BRR9 750 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 TRMT61BQ9BVS5 477 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 C3orf14Q9HBI5 128 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 MCM8Q9UJA3 840 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 ANGPT4Q9Y264 503 aa6.96□□□□□ -1.3
GAPVD1-202ENST00000297933 SLC31A1O15431 190 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 CYP1A2P05177 515 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 HOXC12P31275 282 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 ICAM3P32942 547 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 TIE1P35590 1138 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 TALDO1P37837 337 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 CDH4P55283 916 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 DYNC1I2Q13409 638 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 TERF2Q15554 542 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 CAPN13Q6MZZ7 669 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 CDC73Q6P1J9 531 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 RFWD3Q6PCD5 774 aa6.95□□□□□ -1.3
GAPVD1-202ENST00000297933 SH3BP5LQ7L8J4 393 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms