RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CALML6Q8TD86 181 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 IFT43Q96FT9 208 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 LMLNQ96KR4 655 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PSKH2Q96QS6 385 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SLC46A2Q9BY10 475 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CAB39LQ9H9S4 337 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 TREX1Q9NSU2 369 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 HEY2Q9UBP5 337 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 MID2Q9UJV3 735 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ANKRD6Q9Y2G4 727 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 GRM6O15303 877 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CD160O95971 181 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 AHSGP02765 367 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SERPINE1P05121 402 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ATXN1LP0C7T5 689 aaKnown RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 MYL2P10916 166 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CPA3P15088 417 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CES1P23141 567 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CCR2P41597 374 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CDK18Q07002 472 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ZNF177Q13360 481 aaPredicted RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 GRM3Q14832 879 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PPM1LQ5SGD2 360 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 MBLAC2Q68D91 279 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 LCA5Q86VQ0 697 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SHKBP1Q8TBC3 707 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PPP4R1Q8TF05 950 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 TRIB3Q96RU7 358 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SEMA3CQ99985 751 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 TUBB6Q9BUF5 446 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 KCNK13Q9HB14 408 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ASAH2Q9NR71 780 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SLC2A6Q9UGQ3 507 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 E2F8A0AVK6 867 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PAPSS2O95340 614 aaPredicted RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 GSRP00390 522 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 APOA4P06727 396 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 IRF1P10914 325 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SAT1P21673 171 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CTBP1Q13363 440 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 LAMB3Q13751 1172 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PCLAFQ15004 111 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CYTH1Q15438 398 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ZNF470Q6ECI4 717 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 NEPROQ6NW34 567 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CYB5D1Q6P9G0 228 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ZCCHC23Q6ZST2 131 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 KIAA0408Q6ZU52 694 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SPRED2Q7Z698 418 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CLNKQ7Z7G1 428 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 WDR75Q8IWA0 830 aaKnown RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 DENND6AQ8IWF6 608 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 KIAA1958Q8N8K9 716 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 OR7D4Q8NG98 312 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 FEM1CQ96JP0 617 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SIKE1Q9BRV8 207 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SPON2Q9BUD6 331 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 WWP1Q9H0M0 922 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 NMRAL1Q9HBL8 299 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 TRPC7Q9HCX4 862 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SAR1AQ9NR31 198 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 KLC4Q9NSK0 619 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SEPT3Q9UH03 358 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ZNF106Q9H2Y7 1883 aaKnown RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 MROH6A6NGR9 719 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 HNRNPCL1O60812 293 aaKnown RBP9.21□□□□□ -0.93
PDPN-201ENST00000294489 LUC7L3O95232 432 aaKnown RBP9.21□□□□□ -0.93
PDPN-201ENST00000294489 RHOCP08134 193 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 SERPINF2P08697 491 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 F7P08709 466 aaPredicted RBP9.21□□□□□ -0.93
PDPN-201ENST00000294489 RALBP11234 206 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 FGF3P11487 239 aaPredicted RBP9.21□□□□□ -0.93
PDPN-201ENST00000294489 NQO1P15559 274 aaKnown RBP9.21□□□□□ -0.93
PDPN-201ENST00000294489 PTPN2P17706 415 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 HLA-DPA1P20036 260 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 ARNTP27540 789 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 WEE1P30291 646 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 IRS1P35568 1242 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 CD151P48509 253 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 SLC1A6P48664 564 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 OXCT1P55809 520 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 SLC12A1Q13621 1099 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 DLG2Q15700 870 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 TSTD2Q5T7W7 516 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 CLEC14AQ86T13 490 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 C10orf107Q8IVU9 208 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 MAN1C1Q9NR34 630 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 ZDHHC7Q9NXF8 308 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 FBXO5Q9UKT4 447 aa9.21□□□□□ -0.93
PDPN-201ENST00000294489 CCL16O15467 120 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 DNAJC6O75061 913 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 HAUS5O94927 633 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 KITP10721 976 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 COL6A2P12110 1019 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 STMN1P16949 149 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.94
PDPN-201ENST00000294489 SERPINB3P29508 390 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 SLC1A2P43004 574 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms