RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 MAPK8P45983 427 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 CDK16Q00536 496 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 CAV1Q03135 178 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 UBXN2BQ14CS0 331 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 BMP8AQ7Z5Y6 402 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 IL17RCQ8NAC3 791 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 PJA1Q8NG27 643 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 ZIM3Q96PE6 472 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 APOL2Q9BQE5 337 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 FICDQ9BVA6 458 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 ZDHHC6Q9H6R6 413 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 SUN2Q9UH99 717 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 RRP15Q9Y3B9 282 aaKnown RBP17.95■□□□□ 0.46
CCDC78-201ENST00000293889 PCDHGC4Q9Y5F7 938 aa17.95■□□□□ 0.46
CCDC78-201ENST00000293889 STK25O00506 426 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 PI15O43692 258 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 PIGNO95427 931 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 EPHX1P07099 455 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 NTSR1P30989 418 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 MRPS21P82921 87 aaKnown RBP17.94■□□□□ 0.46
CCDC78-201ENST00000293889 TRAF2Q12933 501 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 FZD5Q13467 585 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 FBXO43Q4G163 708 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 TTMPQ5BVD1 217 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 CAMK1DQ8IU85 385 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 MCUQ8NE86 351 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 PWWP2AQ96N64 755 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 TBL1YQ9BQ87 522 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 HEPHQ9BQS7 1158 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 FSD1LQ9BXM9 530 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 CPEB1Q9BZB8 566 aaKnown RBP17.94■□□□□ 0.46
CCDC78-201ENST00000293889 RAI2Q9Y5P3 530 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.94■□□□□ 0.46
CCDC78-201ENST00000293889 FAM170BA6NMN3 283 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 SMAPO00193 183 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 GPR37L1O60883 481 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 KLF8O95600 359 aaPredicted RBP17.94■□□□□ 0.46
CCDC78-201ENST00000293889 BCL2L1Q07817 233 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 ZNF534Q76KX8 674 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 STK40Q8N2I9 435 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 TXNDC5Q8NBS9 432 aaKnown RBP17.94■□□□□ 0.46
CCDC78-201ENST00000293889 ERLEC1Q96DZ1 483 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 FEM1CQ96JP0 617 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 TUBGCP5Q96RT8 1024 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 RUFY1Q96T51 708 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 TDRD1Q9BXT4 1180 aaKnown RBP17.94■□□□□ 0.46
CCDC78-201ENST00000293889 CAPS2Q9BXY5 557 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 FAM129AQ9BZQ8 928 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 ATP13A3Q9H7F0 1226 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 PRSS16Q9NQE7 514 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 MRPS17Q9Y2R5 130 aaKnown RBP17.94■□□□□ 0.46
CCDC78-201ENST00000293889 WASF2Q9Y6W5 498 aa17.94■□□□□ 0.46
CCDC78-201ENST00000293889 LOC285095A0A1B0GVY8 99 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 MYO1CO00159 1063 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 ADAM23O75077 832 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 CTSLP07711 333 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 CHRNB1P11230 501 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 RAD51Q06609 339 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 CDK18Q07002 472 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 ARSIQ5FYB1 569 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 NAPEPLDQ6IQ20 393 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 SDE2Q6IQ49 451 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 RANBP10Q6VN20 620 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 KDM7AQ6ZMT4 941 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 CAND1Q86VP6 1230 aaKnown RBP17.93■□□□□ 0.46
CCDC78-201ENST00000293889 ZCCHC9Q8N567 271 aaKnown RBP17.93■□□□□ 0.46
CCDC78-201ENST00000293889 OR52K1Q8NGK4 314 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 GRIN3AQ8TCU5 1115 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 ARL8AQ96BM9 186 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 IFT43Q96FT9 208 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 TRIB3Q96RU7 358 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 GABRG3Q99928 467 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 PIH1D1Q9NWS0 290 aaKnown RBP17.93■□□□□ 0.46
CCDC78-201ENST00000293889 IL36AQ9UHA7 158 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 CHKBQ9Y259 395 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 SIT1Q9Y3P8 196 aa17.93■□□□□ 0.46
CCDC78-201ENST00000293889 TRAFD1O14545 582 aaPredicted RBP17.92■□□□□ 0.46
CCDC78-201ENST00000293889 EIF3HO15372 352 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCDC78-201ENST00000293889 SOCS5O75159 536 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 AVILO75366 819 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 PRLP01236 227 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 EPOP01588 193 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 DCNP07585 359 aaKnown RBP17.92■□□□□ 0.46
CCDC78-201ENST00000293889 PDHA1P08559 390 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 FAM153BP0C7A2 387 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 AOC1P19801 751 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 SERPINA4P29622 427 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 CHRNA4P43681 627 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 SARNPP82979 210 aaKnown RBP17.92■□□□□ 0.46
CCDC78-201ENST00000293889 MTM1Q13496 603 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 ELAVL3Q14576 367 aaKnown RBP17.92■□□□□ 0.46
CCDC78-201ENST00000293889 GRM3Q14832 879 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 FAM153CQ494X1 144 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 FNBP1LQ5T0N5 605 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 DENND5AQ6IQ26 1287 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 FOXR1Q6PIV2 292 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 GDPD4Q6W3E5 623 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 PPP1R21Q6ZMI0 780 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 TRMT11Q7Z4G4 463 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms