RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 TAS2R38P59533 333 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 MPP3Q13368 585 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 UGP2Q16851 508 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 CFAP58Q5T655 872 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 ARMC12Q5T9G4 340 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 FBXL19Q6PCT2 694 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 ZC3H14Q6PJT7 736 aaKnown RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 CCDC137Q6PK04 289 aaKnown RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 KDELC1Q6UW63 502 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 SLC36A4Q6YBV0 504 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 ARHGEF18Q6ZSZ5 1173 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 FAM160A2Q8N612 972 aaPredicted RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 FRMD1Q8N878 549 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 CCDC89Q8N998 374 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 SPATA22Q8NHS9 363 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 GANCQ8TET4 914 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 TOE1Q96GM8 510 aaKnown RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 OXNAD1Q96HP4 312 aaPredicted RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 RBM15Q96T37 977 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 GORASP1Q9BQQ3 440 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 PCED1AQ9H1Q7 454 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 FAM153AQ9UHL3 310 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 MBD1Q9UIS9 605 aaPredicted RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 CDC23Q9UJX2 597 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 ARIH1Q9Y4X5 557 aaPredicted RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 WDFY4Q6ZS81 3184 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 AREL1O15033 823 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 SPINT1O43278 529 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 HRO43593 1189 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 ZNF500O60304 480 aaPredicted RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 ANXA9O76027 345 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 CPP00450 1065 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PRLP01236 227 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 IFNB1P01574 187 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 TIMP2P16035 220 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 ACTN2P35609 894 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 RPL26P61254 145 aaKnown RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 POLR2LP62875 67 aaKnown RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 TUBB2AQ13885 445 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PARP6Q2NL67 630 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 C4orf22Q6V702 233 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 ZNF572Q7Z3I7 529 aaPredicted RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 FAM124AQ86V42 546 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 GLIS1Q8NBF1 620 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 OR2T34Q8NGX1 318 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PIH1D2Q8WWB5 315 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 ZNF592Q92610 1267 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 SLCO2A1Q92959 643 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 TRIB3Q96RU7 358 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 TUBB2BQ9BVA1 445 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 DDX47Q9H0S4 455 aaKnown RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PCDH9Q9HC56 1237 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PAK5Q9P286 719 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PCYOX1Q9UHG3 505 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 FEZ2Q9UHY8 353 aaPredicted RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PHTF1Q9UMS5 762 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 RPL26L1Q9UNX3 145 aaKnown RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 AAR2Q9Y312 384 aaKnown RBP13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PPIL1Q9Y3C6 166 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 PCDHB9Q9Y5E1 797 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 FADS3Q9Y5Q0 445 aa13.33□□□□□ -0.27
CCDC42-201ENST00000293845 URI1O94763 535 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 METTL18O95568 372 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 SEMA4FO95754 770 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 EPOP01588 193 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PDHA1P08559 390 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 BCKDHBP21953 392 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GRIA4P48058 902 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GEMP55040 296 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 ELP6Q0PNE2 266 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 SRSF5Q13243 272 aaKnown RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PRPSAP1Q14558 356 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 SPDYCQ5MJ68 293 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GSTA5Q7RTV2 222 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 TTC7BQ86TV6 843 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 CADM4Q8NFZ8 388 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 GRK7Q8WTQ7 553 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PDCD6IPQ8WUM4 868 aaKnown RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 FEM1CQ96JP0 617 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 ZC3H10Q96K80 434 aaKnown RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 MRGPRX2Q96LB1 330 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 RUNDC3BQ96NL0 473 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 MCCC1Q96RQ3 725 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 MLPHQ9BV36 600 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PREBQ9HCU5 417 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 CHKBQ9Y259 395 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 HCN4Q9Y3Q4 1203 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 NEU2Q9Y3R4 380 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PLXNA2O75051 1894 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 PI4KAP42356 2102 aa13.32□□□□□ -0.28
CCDC42-201ENST00000293845 LOC285095A0A1B0GVY8 99 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms