RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MRPL10Q7Z7H8 261 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 TTC7BQ86TV6 843 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 SYTL1Q8IYJ3 562 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 DPP10Q8N608 796 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 OR56A4Q8NGH8 313 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 VAT1Q99536 393 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 NDNQ99608 321 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 OSBPL11Q9BXB4 747 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 HPS4Q9NQG7 708 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 TMCO1Q9UM00 188 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 DERAQ9Y315 318 aa11.94□□□□□ -0.5
SYNGAP1-201ENST00000293748 GRXCR1A8MXD5 290 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 EDF1O60869 148 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 PIGRP01833 764 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 ODC1P11926 461 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 JAK1P23458 1154 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 CCNG1P51959 295 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 BST1Q10588 318 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 RBM44Q6ZP01 1051 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 DAW1Q8N136 415 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 DGCR6LQ9BY27 220 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 PBX4Q9BYU1 374 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 SEMA6AQ9H2E6 1030 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 PIF1Q9H611 641 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 PRPF19Q9UMS4 504 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 CHKBQ9Y259 395 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 TRIM38O00635 465 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 COX4I1P13073 169 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 CAPZA2P47755 286 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 RPS7P62081 194 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 AAK1Q2M2I8 961 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 DGKKQ5KSL6 1271 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 CASP12Q6UXS9 341 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 SLC44A2Q8IWA5 706 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 B3GALNT2Q8NCR0 500 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 SEPT5Q99719 369 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 UBXN6Q9BZV1 441 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 RIBC2Q9H4K1 309 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 POLR1BQ9H9Y6 1135 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 RBM22Q9NW64 420 aaKnown RBP eCLIP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 DSEQ9UL01 958 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 HES2Q9Y543 173 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 RGSL1A5PLK6 1076 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 SERPINA6P08185 405 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 GSTM1P09488 218 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 FAM189BP81408 668 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 POU6F1Q14863 301 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 MGAT5BQ3V5L5 792 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 KLHL17Q6TDP4 642 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 NANOGNBQ7Z5D8 188 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 UBASH3BQ8TF42 649 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 CENPIQ92674 756 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 PAEPP09466 180 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 VAV1P15498 845 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 CSE1LP55060 971 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF57Q68EA5 555 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 GPR153Q6NV75 609 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 EPS8L1Q8TE68 723 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 ACSS3Q9H6R3 686 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 ADPRHL2Q9NX46 363 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 CRNNQ9UBG3 495 aaPredicted RBP11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 ADAM28Q9UKQ2 775 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 DMTF1Q9Y222 760 aa11.93□□□□□ -0.5
SYNGAP1-201ENST00000293748 ARL5CA6NH57 179 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 RAD51BO15315 384 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 TNFRSF21O75509 655 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 SEC24AO95486 1093 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 PPP2R1BP30154 601 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF135P52742 658 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 INO80DQ53TQ3 878 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF605Q86T29 641 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 AADATQ8N5Z0 425 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 RP9Q8TA86 221 aaKnown RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ACOX2Q99424 681 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 TAS2R13Q9NYV9 303 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 BARX2Q9UMQ3 279 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 GNG14A0A1W2PPG7 69 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 CASTOR2A6NHX0 329 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 F5H5T6 163 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 BIRC5O15392 142 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 CXCL8P10145 99 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 LBPP18428 481 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 BMP6P22004 513 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 PSME3P61289 254 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 TNK2Q07912 1038 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF470Q6ECI4 717 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF544Q6NX49 715 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 C11orf88Q6PI97 169 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 NEK10Q6ZWH5 1172 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 C11orf74Q86VG3 221 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 BRSK2Q8IWQ3 736 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ULK2Q8IYT8 1036 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms