RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 IGSF5Q9NSI5 407 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 ARHGEF37A1IGU5 675 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 WASH4PA8MWX3 477 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 J3KR12 359 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 SLC22A2O15244 555 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 NPHS1O60500 1241 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PEX2P28328 305 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 ITKQ08881 620 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 HNRNPDQ14103 355 aaKnown RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 SFT2D3Q587I9 215 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 SH2D4BQ5SQS7 431 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 TRIM67Q6ZTA4 783 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 RTN4RL1Q86UN2 441 aaPredicted RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 APLFQ8IW19 511 aaPredicted RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PHC3Q8NDX5 983 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 STON2Q8WXE9 905 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 HMCESQ96FZ2 354 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 IMP4Q96G21 291 aaKnown RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 C1orf74Q96LT6 269 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 KLHL5Q96PQ7 755 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 OLFM1Q99784 485 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PAK6Q9NQU5 681 aaPredicted RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 NCKIPSDQ9NZQ3 722 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 STK39Q9UEW8 545 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PRPF19Q9UMS4 504 aaKnown RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 TLR6Q9Y2C9 796 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PLXNA3P51805 1871 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 HEATR9A2RTY3 570 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 LYNP07948 512 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 HAPLN1P10915 354 aaPredicted RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 CCL5P13501 91 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 ATP5F1P24539 256 aaPredicted RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 CD86P42081 329 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SERPINH1P50454 418 aaKnown RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 PRMT2P55345 433 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SLC10A7Q0GE19 358 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 RNF220Q5VTB9 566 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 RNF135Q8IUD6 432 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 UMODL1-AS1Q8N2C9 162 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 PPP2R3CQ969Q6 453 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SLC39A13Q96H72 371 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 CDRT15Q96T59 188 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 DDX50Q9BQ39 737 aaKnown RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 KLHL4Q9C0H6 718 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 ARNT2Q9HBZ2 717 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 ZBTB26Q9HCK0 441 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 TET1Q8NFU7 2136 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 TTC24A2A3L6 582 aaPredicted RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 CNTN5O94779 1100 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 HNRNPLP14866 589 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 ADSLP30566 484 aaPredicted RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 PEX19P40855 299 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 RENBPP51606 427 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 DNAJB13P59910 316 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 IHHQ14623 411 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 CLLU1OSQ5K130 101 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 GLB1LQ6UWU2 654 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 KIAA0408Q6ZU52 694 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 PIWIL4Q7Z3Z4 852 aaKnown RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SETD3Q86TU7 594 aaPredicted RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 MON1AQ86VX9 555 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 ZNF683Q8IZ20 524 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 PABPC5Q96DU9 382 aaKnown RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SERPINI1Q99574 410 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SUDS3Q9H7L9 328 aaPredicted RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SLC24A3Q9HC58 644 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 CYP4F12Q9HCS2 524 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 ATP13A1Q9HD20 1204 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 ZDHHC7Q9NXF8 308 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 GTSE1Q9NYZ3 720 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 SCML2Q9UQR0 700 aa15.18■□□□□ 0.02
CCDC116-201ENST00000292779 COPG1Q9Y678 874 aaKnown RBP15.18■□□□□ 0.02
CCDC116-201ENST00000292779 INPPL1O15357 1258 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 ZCCHC18P0CG32 403 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 KCNA5P22460 613 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 OR1G1P47890 313 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 CCNHP51946 323 aaPredicted RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 NDST2P52849 883 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 THOP1P52888 689 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 TBX4P57082 545 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 USP46P62068 366 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 DSC2Q02487 901 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 TRIP10Q15642 601 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 FAM83EQ2M2I3 478 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 ALFQ53S48 1182 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 TECRLQ5HYJ1 363 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 MS4A13Q5J8X5 152 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 FAM26DQ5JW98 314 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 BNC2Q6ZN30 1099 aaPredicted RBP15.17■□□□□ 0.02
CCDC116-201ENST00000292779 NUP93Q8N1F7 819 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 OR13J1Q8NGT2 312 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 IFT43Q96FT9 208 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 ZCWPW1Q9H0M4 648 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 VCX3BQ9H321 246 aa15.17■□□□□ 0.02
CCDC116-201ENST00000292779 PRDM5Q9NQX1 630 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms