RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CDKN2BP42772 138 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 SMIM11AP58511 58 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 PROSER1Q86XN7 944 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 FBXW8Q8N3Y1 598 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 NELL1Q92832 810 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 ZBTB10Q96DT7 871 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 MPP4Q96JB8 637 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 CPXM1Q96SM3 734 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 ERVK-5Q9HDB9 667 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 PLLPQ9Y342 182 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 BAZ2BQ9UIF8 2168 aaKnown RBP12.87□□□□□ -0.35
PTCD1-201ENST00000292478 UBXN8O00124 270 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 PAGE1O75459 146 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 ADH1AP07327 375 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 FECHP22830 423 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 ABCG1P45844 678 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 ST13P50502 369 aaKnown RBP12.87□□□□□ -0.35
PTCD1-201ENST00000292478 PPIDQ08752 370 aaKnown RBP12.87□□□□□ -0.35
PTCD1-201ENST00000292478 DRICH1Q6PGQ1 229 aaPredicted RBP12.87□□□□□ -0.35
PTCD1-201ENST00000292478 BHLHB9Q6PI77 547 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 LPPQ93052 612 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 SLIT2O94813 1529 aa12.87□□□□□ -0.35
PTCD1-201ENST00000292478 ANPEPP15144 967 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PCSK2P16519 638 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TNNI3P19429 210 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PPIBP23284 216 aaKnown RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 SULT2A1Q06520 285 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 CDC73Q6P1J9 531 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 DNAJC14Q6Y2X3 702 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 ZCCHC7Q8N3Z6 543 aaKnown RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TIFAQ96CG3 184 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 OLFM1Q99784 485 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 RNF208Q9H0X6 261 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 NXF3Q9H4D5 531 aaKnown RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TSC22D4Q9Y3Q8 395 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 CLDN5O00501 218 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 MYL12BO14950 172 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PGK1P00558 417 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 COL9A3Q14050 684 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 FGD3Q5JSP0 725 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 CROCCP3Q8IVE0 287 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 MRPS26Q9BYN8 205 aaKnown RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 ROGDIQ9GZN7 287 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PDZD7Q9H5P4 517 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PRKAG3Q9UGI9 489 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 CENPXA8MT69 81 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TLR5O60602 858 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PEX11AO75192 247 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 JAK1P23458 1154 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 RAB14P61106 215 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 R3HCC1LQ7Z5L2 792 aaKnown RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 SPATA19Q7Z5L4 167 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TDRPQ86YL5 185 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TEKT5Q96M29 485 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 HOPXQ9BPY8 73 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 CCDC28BQ9BUN5 200 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 LGALS13Q9UHV8 139 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 C3orf18Q9UK00 162 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 ANGPT4Q9Y264 503 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 A0A1W2PQ67 120 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 C5orf60A6NFR6 353 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 H3BN98 237 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 CCNCP24863 283 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 SPIDRQ14159 915 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 FGD2Q7Z6J4 655 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 RNFT2Q96EX2 444 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 LRCH4O75427 683 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 GNRH1P01148 92 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 HGFP14210 728 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 CDC25CP30307 473 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PTDSS1P48651 473 aaKnown RBP12.86□□□□□ -0.35
PTCD1-201ENST00000292478 HSPA14Q0VDF9 509 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 HSDL1Q3SXM5 330 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 ADGRD1Q6QNK2 874 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 EPHX4Q8IUS5 362 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 OR8H2Q8N162 312 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 TCAIMQ8N3R3 496 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 NDNQ99608 321 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 PCDHB1Q9Y5F3 818 aa12.86□□□□□ -0.35
PTCD1-201ENST00000292478 GRIA3P42263 894 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 CDC42P60953 191 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 RFX4Q33E94 735 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 PLD5Q8N7P1 536 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 HDAC10Q969S8 669 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 NTPCRQ9BSD7 190 aaKnown RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 C1orf50Q9BV19 199 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 SEMA6AQ9H2E6 1030 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 KIAA1522Q9P206 1035 aaPredicted RBP12.85□□□□□ -0.35
PTCD1-201ENST00000292478 COG5Q9UP83 839 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 ABCC6O95255 1503 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 A0A1W2PPM1 405 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 GCATO75600 419 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 GJB1P08034 283 aa12.85□□□□□ -0.35
PTCD1-201ENST00000292478 GTF2E2P29084 291 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms