RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RP9Q8TA86 221 aaKnown RBP16.02■□□□□ 0.15
SMAD6-201ENST00000288840 AP4S1Q9Y587 144 aa16.02■□□□□ 0.15
SMAD6-201ENST00000288840 LTA4HP09960 611 aaKnown RBP16.01■□□□□ 0.15
SMAD6-201ENST00000288840 ZNF789Q5FWF6 425 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 TBCELQ5QJ74 424 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 KIAA0319Q5VV43 1072 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 PAOXQ6QHF9 649 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 ZYG11AQ6WRX3 759 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.01■□□□□ 0.153e-6■■■■□ 23.9
SMAD6-201ENST00000288840 SNRNP27Q8WVK2 155 aaKnown RBP16.01■□□□□ 0.15
SMAD6-201ENST00000288840 PHF12Q96QT6 1004 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 PLAC1Q9HBJ0 212 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 LZTS1Q9Y250 596 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 VWA7Q9Y334 891 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 ZNF831Q5JPB2 1677 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 FOCADQ5VW36 1801 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 DCLK1O15075 740 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 RBP1P09455 135 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 CD1EP15812 388 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 CCNIQ14094 377 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 MRNIPQ6NTE8 343 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 LPCAT1Q8NF37 534 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 CCDC90BQ9GZT6 254 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 RHBDL2Q9NX52 303 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 GDAP2Q9NXN4 497 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 E9PAM4 449 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 H2AFYO75367 372 aaKnown RBP16.01■□□□□ 0.15
SMAD6-201ENST00000288840 NFKBIAP25963 317 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 PAFAH1B3Q15102 231 aaKnown RBP16.01■□□□□ 0.15
SMAD6-201ENST00000288840 HSF5Q4G112 596 aaPredicted RBP16.01■□□□□ 0.15
SMAD6-201ENST00000288840 LIN52Q52LA3 116 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 LGI2Q8N0V4 545 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
SMAD6-201ENST00000288840 BRD8Q9H0E9 1235 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 ING2Q9H160 280 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 AGO3Q9H9G7 860 aaKnown RBP16.01■□□□□ 0.15
SMAD6-201ENST00000288840 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.01■□□□□ 0.156e-8■□□□□ 10.2
SMAD6-201ENST00000288840 MARCH2Q9P0N8 246 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 VTI1BQ9UEU0 232 aa16.01■□□□□ 0.15
SMAD6-201ENST00000288840 ZCWPW2A0A1B0GU75 182 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 SLCO1B7G3V0H7 640 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 SNUPNO95149 360 aaKnown RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 SLC2A3P11169 496 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 CKMT2P17540 419 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 NFYCQ13952 458 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 VPS26BQ4G0F5 336 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 TIFABQ6ZNK6 161 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 MAVSQ7Z434 540 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 ZNF483Q8TF39 744 aaPredicted RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 LPGAT1Q92604 370 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 HMCESQ96FZ2 354 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 MRPL57Q9BQC6 102 aaKnown RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 TLE6Q9H808 572 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 PSMD13Q9UNM6 376 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 TRAF6Q9Y4K3 522 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 COPG1Q9Y678 874 aaKnown RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 ZBBXA8MT70 800 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 F2P00734 622 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 FAM58BPP0C7Q3 252 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 AKR1A1P14550 325 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 ARRB2P32121 409 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 EPGNQ6UW88 154 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 PAQR9Q6ZVX9 377 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 PIWIL4Q7Z3Z4 852 aaKnown RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 ACTRT2Q8TDY3 377 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 LRTOMTQ8WZ04 291 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 LATS2Q9NRM7 1088 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 IRAK4Q9NWZ3 460 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 GMIPQ9P107 970 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 WARS2Q9UGM6 360 aaKnown RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 PTGDR2Q9Y5Y4 395 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 MOXD2PA6NHM9 499 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 TMEM114B3SHH9 223 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 BTN3A1O00481 513 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 MAPRE1Q15691 268 aaKnown RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 FAM110CQ1W6H9 321 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 SLC5A9Q2M3M2 681 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 AAGABQ6PD74 315 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 SH2D5Q6ZV89 423 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 DHFR2Q86XF0 187 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 SYT17Q9BSW7 474 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 ADNPQ9H2P0 1102 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 EIF2B3Q9NR50 452 aaKnown RBP16■□□□□ 0.15
SMAD6-201ENST00000288840 TBC1D13Q9NVG8 400 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 ANKRD6Q9Y2G4 727 aa16■□□□□ 0.15
SMAD6-201ENST00000288840 MYADML2A6NDP7 307 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 CNTN5O94779 1100 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 ITGB1P05556 798 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 HGFP14210 728 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 HECTD2Q5U5R9 776 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 TTC33Q6PID6 262 aaPredicted RBP15.99■□□□□ 0.15
SMAD6-201ENST00000288840 MIER2Q8N344 545 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 TXNDC5Q8NBS9 432 aaKnown RBP15.99■□□□□ 0.15
SMAD6-201ENST00000288840 OR6K2Q8NGY2 324 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 CENPIQ92674 756 aaPredicted RBP15.99■□□□□ 0.15
SMAD6-201ENST00000288840 MTG1Q9BT17 334 aaPredicted RBP15.99■□□□□ 0.15
SMAD6-201ENST00000288840 CASS4Q9NQ75 786 aa15.99■□□□□ 0.15
SMAD6-201ENST00000288840 TMLHEQ9NVH6 421 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms