RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 BCL2L1Q07817 233 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CRYMQ14894 314 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CHI3L2Q15782 390 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 DDIASQ8IXT1 998 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 NAT8LQ8N9F0 302 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 HJURPQ8NCD3 748 aaPredicted RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 OR4K2Q8NGD2 314 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 NTAN1Q96AB6 310 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 PBXIP1Q96AQ6 731 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 EBNA1BP2Q99848 306 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 BRD9Q9H8M2 597 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SLC25A13Q9UJS0 675 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CLEC4EQ9ULY5 219 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 GNGT2O14610 69 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CHADO15335 359 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CLDN11O75508 207 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 TMCC1O94876 653 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 TYRP14679 529 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CCR2P41597 374 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 MAGEA11P43364 429 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SERPINH1P50454 418 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SMARCB1Q12824 385 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 DOK6Q6PKX4 331 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 HAPLN3Q96S86 360 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CDK5RAP1Q96SZ6 601 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SEZ6LQ9BYH1 1024 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 UBXN6Q9BZV1 441 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SLC17A7Q9P2U7 560 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CRLS1Q9UJA2 301 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 PKP3Q9Y446 797 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CFAP73A6NFT4 308 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 C2orf71A6NGG8 1288 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 HACD1B0YJ81 288 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 AP3B1O00203 1094 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 PLK4O00444 970 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 INPP4BO15327 924 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 GCKP35557 465 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 PGM1P36871 562 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CPA2P48052 419 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CDK18Q07002 472 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 TMCO4Q5TGY1 634 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 NADSYN1Q6IA69 706 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 C4orf22Q6V702 233 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 RD3Q7Z3Z2 195 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SLC26A11Q86WA9 606 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SLC41A1Q8IVJ1 513 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 DCBLD1Q8N8Z6 715 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 OR52K2Q8NGK3 314 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 DTX3LQ8TDB6 740 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SDCCAG3Q96C92 435 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 CERS2Q96G23 380 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 DNAJC1Q96KC8 554 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 WRAP53Q9BUR4 548 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 TPP1O14773 563 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 MATN3O15232 486 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 SMAD6O43541 496 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 BAIAP3O94812 1187 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 LUC7L3O95232 432 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 PDHA1P08559 390 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 CEBPBP17676 345 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 BGNP21810 368 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 CD70P32970 193 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 CTSOP43234 321 aaPredicted RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 GPX6P59796 221 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 DPYSQ14117 519 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 ATAT1Q5SQI0 421 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 CHST9Q7L1S5 443 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 PIP4K2CQ8TBX8 421 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 WFDC5Q8TCV5 224 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 SLC26A7Q8TE54 656 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 CENPIQ92674 756 aaPredicted RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 ZSWIM3Q96MP5 696 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 PHTF1Q9UMS5 762 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 NDRG2Q9UN36 371 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 RAI2Q9Y5P3 530 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 TMEM189-UBE2V1I3L0A0 370 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 SH3BGRLO75368 114 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 GUCA1CO95843 209 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 SOX9P48436 509 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 DRG2P55039 364 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 PDAP1Q13442 181 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 CUL3Q13618 768 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 FRMD8P1Q9BZ68 369 aaPredicted RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 DNMT3BQ9UBC3 853 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 STOML1Q9UBI4 398 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 TRHDEQ9UKU6 1024 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 ANGPTL2Q9UKU9 493 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 RUVBL2Q9Y230 463 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 EFR3BQ9Y2G0 817 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 C2orf81A6NN90 581 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 ALOX15BO15296 676 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 PSMD3O43242 534 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 RHOBTB1O94844 696 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 HMGA1P17096 107 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 GDI1P31150 447 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 PFKPQ01813 784 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 PPIDQ08752 370 aaKnown RBP9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 SLC5A9Q2M3M2 681 aa9.1□□□□□ -0.95
CCDC144B-201ENST00000285176 TCEAL5Q5H9L2 206 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms