RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 CNSTQ6PJW8 725 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 LRRC8DQ7L1W4 858 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 SETD3Q86TU7 594 aaPredicted RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 CRIPAKQ8N1N5 446 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 PGBD5Q8N414 524 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 KDM1BQ8NB78 822 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 TXNDC5Q8NBS9 432 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 HEXDCQ8WVB3 486 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 SCG3Q8WXD2 468 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 TSPAN17Q96FV3 270 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 ZNF599Q96NL3 588 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 CASD1Q96PB1 797 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 OLFM1Q99784 485 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 TTLL2Q9BWV7 592 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 GPR62Q9BZJ7 368 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 MAN1C1Q9NR34 630 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 NCKIPSDQ9NZQ3 722 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 RIMKLBQ9ULI2 386 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 ABT1Q9ULW3 272 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 LRCH1Q9Y2L9 728 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 WASF2Q9Y6W5 498 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 TANC1Q9C0D5 1861 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 LDB2O43679 373 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 KIF1CO43896 1103 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 PENKP01210 267 aaPredicted RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 THRAP10827 490 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 SELPP16109 830 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 PPARGP37231 505 aaPredicted RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 MTTPP55157 894 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 SESN3P58005 492 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 TAF10Q12962 218 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 LAMB3Q13751 1172 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 LBRQ14739 615 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 POLD3Q15054 466 aaPredicted RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 ZRSR2Q15696 482 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 LSM12Q3MHD2 195 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 RALGPS1Q5JS13 557 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 RBM20Q5T481 1227 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 RASIP1Q5U651 963 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 RAP1GAP2Q684P5 730 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 LHX8Q68G74 356 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 NADSYN1Q6IA69 706 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 ACAD11Q709F0 780 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 GPATCH11Q8N954 259 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 GPR150Q8NGU9 434 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 RP9Q8TA86 221 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 DTX3LQ8TDB6 740 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 PABPC5Q96DU9 382 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 FEM1CQ96JP0 617 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 KLHL5Q96PQ7 755 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 CRISPLD1Q9H336 500 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 VPS28Q9UK41 221 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 CDYLQ9Y232 598 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 SSX2IPQ9Y2D8 614 aa7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-201ENST00000282470 ENPP3O14638 875 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 HLA-DPA1P20036 260 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 PIK3R1P27986 724 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 CCR10P46092 362 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 SLC12A2P55011 1212 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 MAXP61244 160 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 ELAVL2Q12926 359 aaKnown RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 CCNIQ14094 377 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 GPNMBQ14956 572 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 ACAP2Q15057 778 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 ZNF789Q5FWF6 425 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 C10orf120Q5SQS8 335 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 AGAP9Q5VTM2 703 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 ANO7Q6IWH7 933 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 RSPO2Q6UXX9 243 aaPredicted RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 FBXW8Q8N3Y1 598 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 SLC25A41Q8N5S1 370 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 LENG8Q96PV6 779 aaPredicted RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 CDK5RAP1Q96SZ6 601 aaKnown RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 TMEM175Q9BSA9 504 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 POLR1EQ9GZS1 481 aaKnown RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 MRGBPQ9NV56 204 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 UXTQ9UBK9 157 aaPredicted RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 CORO1CQ9ULV4 474 aaPredicted RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 PRPF19Q9UMS4 504 aaKnown RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 SLC12A8A0AV02 714 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 RGSL1A5PLK6 1076 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 TRPC5OSA6NMA1 111 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 H7C4K7 107 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 ARVCFO00192 962 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 MAP3K7O43318 606 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 SOAT2O75908 522 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 S1PR4O95977 384 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 FGF1P05230 155 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 RBP1P09455 135 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 LTA4HP09960 611 aaKnown RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 HOXB8P17481 243 aaPredicted RBP7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 EPHA3P29320 983 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 SLC11A1P49279 550 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 NFKB2Q00653 900 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 CUL3Q13618 768 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 FUT10Q6P4F1 479 aa7.29□□□□□ -1.24
SPARCL1-201ENST00000282470 RNF19BQ6ZMZ0 732 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms