RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 IGFLR1Q9H665 355 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 RPF1Q9H9Y2 349 aaKnown RBP10.43□□□□□ -0.74
UPF3B-201ENST00000276201 SLC38A7Q9NVC3 462 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 TUBGCP4Q9UGJ1 667 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 SLC8A2Q9UPR5 921 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 RNF11Q9Y3C5 154 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 KANSL1LA0AUZ9 987 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 WDR27A2RRH5 827 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 CCDC160A6NGH7 325 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 TRIM64BA6NI03 449 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 PER2O15055 1255 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 LINC01565O15544 149 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 CXCL14O95715 111 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 SOD2P04179 222 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 TYK2P29597 1187 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 CLCNKBP51801 687 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 LIMK2P53671 638 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 SNX16P57768 344 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 MRPS22P82650 360 aaKnown RBP10.43□□□□□ -0.74
UPF3B-201ENST00000276201 TFF2Q03403 129 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 VWA5B1Q5TIE3 1220 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 FUT10Q6P4F1 479 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 CD300LGQ6UXG3 332 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 FAM183BPQ6ZVS7 135 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 TTC30AQ86WT1 665 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.43□□□□□ -0.74
UPF3B-201ENST00000276201 LZTR1Q8N653 840 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 ZNF781Q8N8C0 355 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 MRPL43Q8N983 215 aaKnown RBP10.43□□□□□ -0.74
UPF3B-201ENST00000276201 HIPK4Q8NE63 616 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 MAPK15Q8TD08 544 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 CENPIQ92674 756 aaPredicted RBP10.43□□□□□ -0.74
UPF3B-201ENST00000276201 HLA-CQ95604 372 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 ASB9Q96DX5 294 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 UROC1Q96N76 676 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 CDRT15Q96T59 188 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 MCMBPQ9BTE3 642 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 ANKRD60Q9BZ19 345 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 UBE2ZQ9H832 354 aaPredicted RBP10.43□□□□□ -0.74
UPF3B-201ENST00000276201 SNX15Q9NRS6 342 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 DDX18Q9NVP1 670 aaKnown RBP10.43□□□□□ -0.74
UPF3B-201ENST00000276201 EPS15L1Q9UBC2 864 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 MYRFQ9Y2G1 1151 aa10.43□□□□□ -0.74
UPF3B-201ENST00000276201 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 M0QYV0 167 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 CYP2F1P24903 491 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 TTKP33981 857 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 PRKAA1Q13131 559 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 PDAP1Q13442 181 aaKnown RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 ZBTB6Q15916 424 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 DUSP6Q16828 381 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 UPP1Q16831 310 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 C6orf52Q5T4I8 152 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 SYCP2LQ5T4T6 812 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 DUS1LQ6P1R4 473 aaKnown RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 SCARA5Q6ZMJ2 495 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 PSTKQ8IV42 348 aaKnown RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 EFHBQ8N7U6 833 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 C3orf58Q8NDZ4 430 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 BHLHE22Q8NFJ8 381 aaPredicted RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 CXorf38Q8TB03 319 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 PABPC5Q96DU9 382 aaKnown RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 B3GALT6Q96L58 329 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 OR52B2Q96RD2 323 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 RANBP9Q96S59 729 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 CCT7Q99832 543 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 SLC4A5Q9BY07 1137 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 DNAI2Q9GZS0 605 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 COPS7BQ9H9Q2 264 aaPredicted RBP10.42□□□□□ -0.74
UPF3B-201ENST00000276201 WDR41Q9HAD4 459 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 ZBTB26Q9HCK0 441 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 C8orf4Q9NR00 106 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 OXSMQ9NWU1 459 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 SIX4Q9UIU6 781 aa10.42□□□□□ -0.74
UPF3B-201ENST00000276201 TMEM189-UBE2V1I3L0A0 370 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 LILRB3O75022 631 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 GLP2RO95838 553 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 NFICP08651 508 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 FAM163BP0C2L3 166 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 ATP6V1B1P15313 513 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 RPL14P50914 215 aaKnown RBP10.41□□□□□ -0.74
UPF3B-201ENST00000276201 GALK1P51570 392 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 MS4A2Q01362 244 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 SLC10A2Q12908 348 aaPredicted RBP10.41□□□□□ -0.74
UPF3B-201ENST00000276201 ADAM15Q13444 863 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 SEL1L3Q68CR1 1132 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 HEATR6Q6AI08 1181 aaKnown RBP10.41□□□□□ -0.74
UPF3B-201ENST00000276201 JADE1Q6IE81 842 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 IYDQ6PHW0 289 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 OLFML1Q6UWY5 402 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 ZYG11AQ6WRX3 759 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 ANKFN1Q8N957 763 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 VN1R2Q8NFZ6 395 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 ZNF420Q8TAQ5 688 aaPredicted RBP10.41□□□□□ -0.74
UPF3B-201ENST00000276201 ITPKCQ96DU7 683 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 CERS2Q96G23 380 aa10.41□□□□□ -0.74
UPF3B-201ENST00000276201 CNDP2Q96KP4 475 aaKnown RBP10.41□□□□□ -0.74
UPF3B-201ENST00000276201 DOK1Q99704 481 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms