RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 FGF19O95750 216 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 RALBP11234 206 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 PTPRCAPQ14761 206 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 PDK4Q16654 411 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 SIRPB2Q5JXA9 342 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 TRPM8Q7Z2W7 1104 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 MCUR1Q96AQ8 359 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 ERP27Q96DN0 273 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 TRMT2BQ96GJ1 504 aaKnown RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 KLF16Q9BXK1 252 aaPredicted RBP9.39□□□□□ -0.91
SSR3-201ENST00000265044 SLC46A2Q9BY10 475 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 RHOJQ9H4E5 214 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 ATP13A3Q9H7F0 1226 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 NMRAL1Q9HBL8 299 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 CATSPERZQ9NTU4 200 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 ZFP69BQ9UJL9 534 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 KCTD3Q9Y597 815 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 USH1CQ9Y6N9 552 aa9.39□□□□□ -0.91
SSR3-201ENST00000265044 FAM92AA1XBS5 289 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 C2orf71A6NGG8 1288 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 PRPF4O43172 522 aaKnown RBP eCLIP9.38□□□□□ -0.91
SSR3-201ENST00000265044 KDELR3O43731 214 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 GPC4O75487 556 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 ATP5BP06576 529 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 ITGB6P18564 788 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 LPOP22079 712 aaPredicted RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 FMO4P31512 558 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 SLC12A1Q13621 1099 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 TSTA3Q13630 321 aaPredicted RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 LY6G5CQ5SRR4 150 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 TSTD2Q5T7W7 516 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 AGAP9Q5VTM2 703 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 CES5AQ6NT32 575 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 FRA10AC1Q70Z53 315 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 MARK2Q7KZI7 788 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 OR13C4Q8NGS5 318 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 SPPL3Q8TCT6 385 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 ATXN2LQ8WWM7 1075 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 IMP4Q96G21 291 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 MYRFLQ96LU7 910 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 FEM1AQ9BSK4 669 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 FAM96AQ9H5X1 160 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 THG1LQ9NWX6 298 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 VPS51Q9UID3 782 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 APOBEC2Q9Y235 224 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 VNN2O95498 520 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 TOP3BO95985 862 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 F11P03951 625 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 MPOP05164 745 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 PYGLP06737 847 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 DRD4P21917 467 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 RASSF2P50749 326 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 PLK1P53350 603 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 ZNF534Q76KX8 674 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 BANPQ8N9N5 519 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 PHOSPHO2Q8TCD6 241 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 KCTD4Q8WVF5 259 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 PHF21BQ96EK2 531 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 ZNF599Q96NL3 588 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 RBBP8Q99708 897 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 ABCF3Q9NUQ8 709 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 DUS2Q9NX74 493 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 IL37Q9NZH6 218 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 HSFX1Q9UBD0 423 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 PLLPQ9Y342 182 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 CD3EAPO15446 510 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 SNX2O60749 519 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 OAS1P00973 400 aaKnown RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 UGT2B4P06133 528 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 GKP32189 559 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 LIMK2P53671 638 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 NRG1Q02297 640 aaPredicted RBP9.38□□□□□ -0.91
SSR3-201ENST00000265044 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 CHST9Q7L1S5 443 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 OR4L1Q8NH43 312 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 ACDQ96AP0 544 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 MYEOVQ96EZ4 313 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 PSKH2Q96QS6 385 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 OMDQ99983 421 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 HCFC2Q9Y5Z7 792 aa9.38□□□□□ -0.91
SSR3-201ENST00000265044 SCN5AQ14524 2016 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 BRCA2P51587 3418 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 THSD7BQ9C0I4 1608 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 K7ERQ8 282 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 SNX3O60493 162 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 GJB3O75712 270 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 TRIM16O95361 564 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 ZDHHC11BP0C7U3 371 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 CES1P23141 567 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 HADHAP40939 763 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 MAGEA6P43360 314 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 SGSHP51688 502 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 ZNF460Q14592 562 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 FSCBQ5H9T9 825 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 TEDDM1Q5T9Z0 273 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 MANEALQ5VSG8 457 aa9.37□□□□□ -0.91
SSR3-201ENST00000265044 KYAT3Q6YP21 454 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms