RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 IPO13O94829 963 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 SPATA19Q7Z5L4 167 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 WWOXQ9NZC7 414 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 BCKDKO14874 412 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 CREB1P16220 341 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 PSMA1P25786 263 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 RPL3P39023 403 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ZNF484Q5JVG2 852 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 KAT5Q92993 513 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ADAM7Q9H2U9 754 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 LOC100506127A0A0U1RQW1 187 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ILVBLA1L0T0 632 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 GRIA2P42262 883 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 GABARAPL2P60520 117 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 CYP4X1Q8N118 509 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 CPSF7Q8N684 471 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 DCAKDQ8WVC6 231 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ELOVL6Q9H5J4 265 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 CPNE5Q9HCH3 593 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 F5H423 210 aaPredicted RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 G3V2T6 193 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 THRBP10828 461 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 TMEM53Q6P2H8 277 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ATP6V1HQ9UI12 483 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 E7ESA3 106 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 NOS1APO75052 506 aaPredicted RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 LRCH4O75427 683 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 PMPCBO75439 489 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 SERPINA1P01009 418 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 KIZQ2M2Z5 673 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 PABPC1LQ4VXU2 614 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 KLHL17Q6TDP4 642 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ZNF540Q8NDQ6 660 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 BPIFB6Q8NFQ5 453 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 UBASH3BQ8TF42 649 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 PCDHB18PQ96TA0 734 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 WDCPQ9H6R7 721 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 AZIN1O14977 448 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 ZSCAN5DPP0CG00 497 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 WARSP23381 471 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 CCT3P49368 545 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 CYS1Q717R9 158 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 DNAJB7Q7Z6W7 309 aaPredicted RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 SYTL1Q8IYJ3 562 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 SETD4Q9NVD3 440 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 SCELO95171 688 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 IDH3AP50213 366 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 USP4Q13107 963 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 CCDC36Q8IYA8 594 aa11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 PRICKLE1Q96MT3 831 aaPredicted RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 NUSAP1Q9BXS6 441 aaKnown RBP11.75□□□□□ -0.53
DNMT3A-201ENST00000264709 PRKCHP24723 683 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 KPNA1P52294 538 aaPredicted RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 CACNB3P54284 484 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 SMIM11AP58511 58 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 MERTKQ12866 999 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 KCTD8Q6ZWB6 473 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 KAT8Q9H7Z6 458 aaKnown RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ATRNL1Q5VV63 1379 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 M0QYT0 321 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 RGS14O43566 566 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 TRIM71Q2Q1W2 868 aaKnown RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ADAMTSL2Q86TH1 951 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 GLB1L3Q8NCI6 653 aaPredicted RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 TEX264Q9Y6I9 313 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 EME2A4GXA9 379 aaPredicted RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ARP10275 920 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 HALP42357 657 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 FASTKD3Q14CZ7 662 aaKnown RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ERMP1Q7Z2K6 904 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ADGRE3Q9BY15 652 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 SARS2Q9NP81 518 aaKnown RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ITM2BQ9Y287 266 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ANKRD33BA6NCL7 494 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 KLF1Q13351 362 aaPredicted RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 RHBDF2Q6PJF5 856 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 FAM43BQ6ZT52 329 aaPredicted RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 USP43Q70EL4 1123 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 LRRC17Q8N6Y2 441 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 MLPHQ9BV36 600 aaPredicted RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 MARCH7Q9H992 704 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 TGFBR2P37173 567 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 HNRNPFP52597 415 aaKnown RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ERICH5Q6P6B1 374 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 KLHL35Q6PF15 583 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 NDFIP2Q9NV92 336 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 H2AFY2Q9P0M6 372 aaPredicted RBP11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 NFASCO94856 1347 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 CALCAP01258 141 aa11.74□□□□□ -0.53
DNMT3A-201ENST00000264709 ITGAXP20702 1163 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms