RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 FANCGO15287 622 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 PEX11AO75192 247 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 ANPEPP15144 967 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 ATXN1P54253 815 aaKnown RBP16.83■□□□□ 0.28
PHRF1-201ENST00000264555 DAB2P98082 770 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 SLC20A2Q08357 652 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 TERB1Q8NA31 727 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 CNTN3Q9P232 1028 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 TRIM38O00635 465 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 FAM163BP0C2L3 166 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 MICU2Q8IYU8 434 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 RMND5BQ96G75 393 aaPredicted RBP16.83■□□□□ 0.28
PHRF1-201ENST00000264555 SLC25A51Q9H1U9 297 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 TIAM2Q8IVF5 1701 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 AZIN1O14977 448 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 GSC2O15499 205 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 S100A3P33764 101 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 TARBP2Q15633 366 aaKnown RBP16.83■□□□□ 0.28
PHRF1-201ENST00000264555 AAGABQ6PD74 315 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 CCDC81Q6ZN84 652 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 TAS1R3Q7RTX0 852 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 CD101Q93033 1021 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 MFSD3Q96ES6 412 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 GPR88Q9GZN0 384 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 MIEF1Q9NQG6 463 aa16.83■□□□□ 0.28
PHRF1-201ENST00000264555 RRM2P31350 389 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 SKIV2LQ15477 1246 aaKnown RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 ARMC6Q6NXE6 501 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 MARK2Q7KZI7 788 aaKnown RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 DHDDSQ86SQ9 333 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 STARD8Q92502 1023 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 OSBPL7Q9BZF2 842 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 KLQ9UEF7 1012 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 PPM1JQ5JR12 505 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 TRIM48Q8IWZ4 208 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 ACTRT2Q8TDY3 377 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 NTAN1Q96AB6 310 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 ZFRQ96KR1 1074 aaKnown RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 LPIN3Q9BQK8 851 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 DNAJC28Q9NX36 388 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 SH3BP4Q9P0V3 963 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 LIMD1Q9UGP4 676 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 DOLKQ9UPQ8 538 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 KPNA3O00505 521 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 SLC9A3R1O14745 358 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 SCAMP3O14828 347 aaKnown RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 FKTNO75072 461 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 SLC25A11Q02978 314 aaKnown RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 DSG4Q86SJ6 1040 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 CFAP52Q8N1V2 620 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 RCN3Q96D15 328 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 RTKNQ9BST9 563 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 TMCC3Q9ULS5 477 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 TCAF1Q9Y4C2 921 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 C1orf232A0A0U1RR37 186 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 CLOCKO15516 846 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 RPP40O75818 363 aaKnown RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 GRK4P32298 578 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 GPRIN3Q6ZVF9 776 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 PIK3R5Q8WYR1 880 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 STK39Q9UEW8 545 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 LEF1Q9UJU2 399 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-201ENST00000264555 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
PHRF1-201ENST00000264555 GRIN2DO15399 1336 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 KPNA5O15131 536 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 CAPN15O75808 1086 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 HGFP14210 728 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 OGDHQ02218 1023 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 HECTD2Q5U5R9 776 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 KIAA0408Q6ZU52 694 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 OOSP2Q86WS3 158 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 ITFG1Q8TB96 612 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 RSPH1Q8WYR4 309 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 H2AFY2Q9P0M6 372 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-201ENST00000264555 PLIN3O60664 434 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 PCDH8O95206 1070 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 EOMESO95936 686 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 EPB42P16452 691 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 TSPAN8P19075 237 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 SETMARQ53H47 684 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-201ENST00000264555 OTUD3Q5T2D3 398 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-201ENST00000264555 CLEC20AQ6ZU45 233 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 EID3Q8N140 333 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 RTL3Q8N8U3 475 aaKnown RBP16.81■□□□□ 0.28
PHRF1-201ENST00000264555 FAM13CQ8NE31 585 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 TRAPPC9Q96Q05 1148 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 Q9Y3F1 56 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 KCNU1A8MYU2 1149 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 CATP04040 527 aaKnown RBP16.81■□□□□ 0.28
PHRF1-201ENST00000264555 MC4RP32245 332 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 PPM1AP35813 382 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 NDST2P52849 883 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 TRIM69Q86WT6 500 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 TRAF6Q9Y4K3 522 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 DNM1LO00429 736 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 KCNH1O95259 989 aa16.81■□□□□ 0.28
PHRF1-201ENST00000264555 HSPA14Q0VDF9 509 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms