RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TSPY26PQ9H489 355 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 CAAP1Q9H8G2 361 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 PCDH18Q9HCL0 1135 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 DNAJC28Q9NX36 388 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 ANKRD11Q6UB99 2663 aaPredicted RBP16.23■□□□□ 0.19
USE1-201ENST00000263897 ACACAQ13085 2346 aa16.23■□□□□ 0.19
USE1-201ENST00000263897 NEMP2A6NFY4 417 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
USE1-201ENST00000263897 MUSKO15146 869 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 RFPL3O75679 317 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 CSF2P04141 144 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 GIMD1P0DJR0 217 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 IL4RP24394 825 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 SERPINA4P29622 427 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 RENBPP51606 427 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 SLC10A7Q0GE19 358 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 PDE1CQ14123 709 aaPredicted RBP16.22■□□□□ 0.19
USE1-201ENST00000263897 TRIM14Q14142 442 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 LBRQ14739 615 aaKnown RBP16.22■□□□□ 0.19
USE1-201ENST00000263897 SLC18A3Q16572 532 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 ASTE1Q2TB18 679 aaPredicted RBP16.22■□□□□ 0.19
USE1-201ENST00000263897 TPRG1LQ5T0D9 272 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 TMPRSS12Q86WS5 348 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 MARCH9Q86YJ5 346 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 OR4C6Q8NH72 309 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 PSKH2Q96QS6 385 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 C1QTNF7Q9BXJ2 289 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 ATP13A3Q9H7F0 1226 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 PCDH12Q9NPG4 1184 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 MBNL1Q9NR56 388 aaKnown RBP16.22■□□□□ 0.19
USE1-201ENST00000263897 SEPT3Q9UH03 358 aa16.22■□□□□ 0.19
USE1-201ENST00000263897 ANKRD36A6QL64 1941 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 LRRK1Q38SD2 2015 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 CHD6Q8TD26 2715 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 TOR1BO14657 336 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 SCAMP1O15126 338 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 MAFKO60675 156 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 H2AFZP0C0S5 128 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 NME1P15531 152 aaKnown RBP16.21■□□□□ 0.19
USE1-201ENST00000263897 ACP1P24666 158 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 IGFALSP35858 605 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 SSR1P43307 286 aaKnown RBP16.21■□□□□ 0.19
USE1-201ENST00000263897 SCNN1BP51168 640 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 CDH6P55285 790 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 YPEL5P62699 121 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 BCL2L1Q07817 233 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 ILKQ13418 452 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 CAMK2BQ13554 666 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 HADHQ16836 314 aaKnown RBP16.21■□□□□ 0.19
USE1-201ENST00000263897 HS1BP3Q53T59 392 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 CFAP58Q5T655 872 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 TMCO4Q5TGY1 634 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 ERAP2Q6P179 960 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 KDM7AQ6ZMT4 941 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 H2AFVQ71UI9 128 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 PARGQ86W56 976 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 ZSWIM9Q86XI8 627 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 VSTM4Q8IW00 320 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 TP53I13Q8NBR0 393 aaPredicted RBP16.21■□□□□ 0.19
USE1-201ENST00000263897 ZNF564Q8TBZ8 553 aaPredicted RBP16.21■□□□□ 0.19
USE1-201ENST00000263897 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 ECHDC3Q96DC8 303 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 NSMCE3Q96MG7 304 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 CTTNBP2NLQ9P2B4 639 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 RCOR3Q9P2K3 495 aaPredicted RBP16.21■□□□□ 0.19
USE1-201ENST00000263897 UVRAGQ9P2Y5 699 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 KLF15Q9UIH9 416 aa16.21■□□□□ 0.19
USE1-201ENST00000263897 APC2O95996 2303 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 PKD1L2Q7Z442 2459 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 SSU72P8A0A1W2PR75 194 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 FAM149AA5PLN7 773 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 TRABD2BA6NFA1 517 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 SRRM3A6NNA2 597 aaPredicted RBP16.2■□□□□ 0.18
USE1-201ENST00000263897 TAF4O00268 1085 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 FFAR2O15552 330 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 PROSCO94903 275 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 PEX11BO96011 259 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 ARSEP51690 589 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 THOP1P52888 689 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 POLR2LP62875 67 aaKnown RBP16.2■□□□□ 0.18
USE1-201ENST00000263897 EIF2B5Q13144 721 aaKnown RBP16.2■□□□□ 0.18
USE1-201ENST00000263897 PTK2BQ14289 1009 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 KRT81Q14533 505 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 AGERQ15109 404 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 TSR1Q2NL82 804 aaKnown RBP16.2■□□□□ 0.18
USE1-201ENST00000263897 ATP13A4Q4VNC1 1196 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 CTNNBL1Q8WYA6 563 aaPredicted RBP16.2■□□□□ 0.18
USE1-201ENST00000263897 PACSIN1Q9BY11 444 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 ZNHIT6Q9NWK9 470 aaKnown RBP16.2■□□□□ 0.18
USE1-201ENST00000263897 NLGN3Q9NZ94 848 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 ATP8A1Q9Y2Q0 1164 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 COQ6Q9Y2Z9 468 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 CSNK1G3Q9Y6M4 447 aa16.2■□□□□ 0.18
USE1-201ENST00000263897 CFAP69A5D8W1 941 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 H3BM21 787 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 TRAFD1O14545 582 aaPredicted RBP16.19■□□□□ 0.18
USE1-201ENST00000263897 CD48P09326 243 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 ALPPL2P10696 532 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 C6P13671 934 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 JUPP14923 745 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms