RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 AMPD1P23109 780 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 ELK3P41970 407 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 PCDH1Q08174 1060 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 METTL18O95568 372 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 LDOC1O95751 146 aaPredicted RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 SLC35G4P0C7Q5 338 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 ECHS1P30084 290 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 MADCAM1Q13477 382 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 CRTC3Q6UUV7 619 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 MRPL9Q9BYD2 267 aaKnown RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 SAMHD1Q9Y3Z3 626 aaKnown RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 FTH1P02794 183 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 ABL2P42684 1182 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 WDR59Q6PJI9 974 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 NOA1Q8NC60 698 aaKnown RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TCP10LQ8TDR4 215 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 ZNF518BQ9C0D4 1074 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 SPHKAPQ2M3C7 1700 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 A0A087X0B3 334 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 CST1P01037 141 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 CORO7P57737 925 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 CYP4F8P98187 520 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 LRRC69Q6ZNQ3 347 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 CDYL2Q8N8U2 506 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 MYCBPAPQ8TBZ2 947 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 DNASE1L2Q92874 299 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 APOPT1Q96IL0 206 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 MCMBPQ9BTE3 642 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 RGSL1A5PLK6 1076 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 PROCP04070 461 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 CSH1P0DML2 217 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 CSH2P0DML3 217 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 RPL3P39023 403 aaKnown RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 NPTX2P47972 431 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TMPRSS6Q8IU80 811 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 EFHD2Q96C19 240 aaPredicted RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 DCLK3Q9C098 648 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3DA0A087WVF3 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3IA0A087WXS9 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3EA0A087X179 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3KA0A087X1G2 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 C15orf38-AP3S2A0A0A6YYH1 394 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3FA6NER0 549 aaPredicted RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3LB9A6J9 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3HP0C7X1 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 GRK5P34947 590 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3GQ6DHY5 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3CQ6IPX1 549 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 ARPINQ7Z6K5 226 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 TBC1D3Q8IZP1 549 aaPredicted RBP11.44□□□□□ -0.58
PTPN4-201ENST00000263708 NKIRAS2Q9NYR9 191 aa11.44□□□□□ -0.58
PTPN4-201ENST00000263708 RGL2O15211 777 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 PPP3R1P63098 170 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 MAPKAPK3Q16644 382 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SMIM5Q71RC9 77 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TDRPQ86YL5 185 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TNFAIP8L1Q8WVP5 186 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SMURF1Q9HCE7 757 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 MARCH2Q9P0N8 246 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ABI3Q9P2A4 366 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 BHMG1C9JSJ3 638 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 FAM86B1E9PN63 330 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 PLOD2O00469 737 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 MAFKO60675 156 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 GP5P40197 560 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SLC34A1Q06495 639 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 FAM129CQ86XR2 697 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 DNAJA4Q8WW22 397 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 JMJD4Q9H9V9 463 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TMBIM4Q9HC24 238 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SLC24A2Q9UI40 661 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CDHR2Q9BYE9 1310 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 HYKKA2RU49 373 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 PLGP00747 810 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CBX2Q14781 532 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 LSM12Q3MHD2 195 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ABCA11PQ4W5N1 156 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 DENND5AQ6IQ26 1287 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 PCDH20Q8N6Y1 951 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ELOVL4Q9GZR5 314 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TRHDEQ9UKU6 1024 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 MRPS23Q9Y3D9 190 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 RPL38P63173 70 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ZNF155Q12901 538 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 PPP1R15BQ5SWA1 713 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ING5Q8WYH8 240 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ELMO3Q96BJ8 720 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 RGS17Q9UGC6 210 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 NRKQ7Z2Y5 1582 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 OR14I1A6ND48 311 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CACNB4O00305 520 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 IL12BP29460 328 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CDH8P55286 799 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TTC7BQ86TV6 843 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SGMS1Q86VZ5 419 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 PHYKPLQ8IUZ5 450 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CHERPQ8IWX8 916 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 C2orf73Q8N5S3 287 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SMPDL3BQ92485 455 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms