RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SMAD1Q15797 465 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 UAP1Q16222 522 aaPredicted RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 HNRNPA1L2Q32P51 320 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 LRRC73Q5JTD7 316 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 NAPEPLDQ6IQ20 393 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 EMBQ6PCB8 327 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CENPUQ71F23 418 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 ZSWIM9Q86XI8 627 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CHPFQ8IZ52 775 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 FBXO36Q8NEA4 188 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 LPCAT1Q8NF37 534 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 FAM3CQ92520 227 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CAVIN3Q969G5 261 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 RMDN1Q96DB5 314 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 NECAB3Q96P71 396 aaPredicted RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 HEPHQ9BQS7 1158 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 TDRD1Q9BXT4 1180 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 FAM129AQ9BZQ8 928 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 EPB41L4BQ9H329 900 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CDC42EP4Q9H3Q1 356 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 XAB2Q9HCS7 855 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 HAUS2Q9NVX0 235 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 NINJ2Q9NZG7 142 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 PRKAG3Q9UGI9 489 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 SARDHQ9UL12 918 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 STARD13Q9Y3M8 1113 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 MTF2Q9Y483 593 aaPredicted RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 PCDHB9Q9Y5E1 797 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 MAD1L1Q9Y6D9 718 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 STON1Q9Y6Q2 735 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 KRBA1A5PL33 1030 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 A8MX80 341 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 E7ESA3 106 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 SMAPO00193 183 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 NDC80O14777 642 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ALOX15BO15296 676 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 LEFTY1O75610 366 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 KLF8O95600 359 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ALPIP09923 528 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 HNRNPLP14866 589 aaKnown RBP eCLIP9.81□□□□□ -0.842e-10■■■■□ 25.5
SNRNP40-201ENST00000263694 RECQLP46063 649 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 PMS2P54278 862 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 AP1S1P61966 158 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 GRSF1Q12849 480 aaKnown RBP eCLIP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 MSLNQ13421 630 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 POU6F1Q14863 301 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 MLF2Q15773 248 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 PREPLQ4J6C6 727 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 CASC4Q6P4E1 433 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 LINC00523Q86TU6 105 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 CACUL1Q86Y37 369 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 HNRNPLLQ8WVV9 542 aaKnown RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 UBLCP1Q8WVY7 318 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 CFAP36Q96G28 342 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ZNF778Q96MU6 729 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 KLHL32Q96NJ5 620 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ASB2Q96Q27 587 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 FAM129BQ96TA1 746 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 SUV39H2Q9H5I1 410 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ATP13A3Q9H7F0 1226 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 PLAC1Q9HBJ0 212 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 PRSS16Q9NQE7 514 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ARGLU1Q9NWB6 273 aaPredicted RBP9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 ZNF446Q9NWS9 450 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC8A2Q9UPR5 921 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 KCTD3Q9Y597 815 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 SPO11Q9Y5K1 396 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 TEX264Q9Y6I9 313 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 CKAP5Q14008 2032 aa9.81□□□□□ -0.84
SNRNP40-201ENST00000263694 EDDM13A0A1B0GTR0 161 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SDR42E2A6NKP2 422 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PLK4O00444 970 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 AURKAO14965 403 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 BUD23O43709 281 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 FZD6O60353 706 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ADAM23O75077 832 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 RNF40O75150 1001 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PIAS1O75925 651 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PGLSO95336 258 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ACSL3O95573 720 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 NDST3O95803 873 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 MLNP12872 115 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SSTR1P30872 391 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 HSD17B3P37058 310 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ABL2P42684 1182 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 GPX6P59796 221 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SEPT6Q14141 434 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PTPRCAPQ14761 206 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SLMAPQ14BN4 828 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 QPCTQ16769 361 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ARMC12Q5T9G4 340 aa9.8□□□□□ -0.84
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