RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ATP5F1P24539 256 aaPredicted RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 AQP4P55087 323 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 RAPSNQ13702 412 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 TIGD2Q4W5G0 525 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 HYIQ5T013 277 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 CLIP3Q96DZ5 547 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 FEM1CQ96JP0 617 aa12.14□□□□□ -0.47
SMG6-201ENST00000263073 LEF1Q9UJU2 399 aaPredicted RBP12.14□□□□□ -0.47
SMG6-201ENST00000263073 HDAC3O15379 428 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 WARSP23381 471 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 RTP1P59025 263 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 TOP3AQ13472 1001 aaPredicted RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 CPSF6Q16630 551 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMG6-201ENST00000263073 GPAT3Q53EU6 434 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 IQCKQ8N0W5 287 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 RNASE11Q8TAA1 199 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 IPCEF1Q8WWN9 437 aaPredicted RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 LRTOMTQ8WZ04 291 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 COPS5Q92905 334 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 EBNA1BP2Q99848 306 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 FAM126AQ9BYI3 521 aaPredicted RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 RHOBTB2Q9BYZ6 727 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 TM6SF2Q9BZW4 377 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 PPIEQ9UNP9 301 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 POLR1DQ9Y2S0 133 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 AGPSO00116 658 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 ZBTB14O43829 449 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 CELF2O95319 508 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 MAPTP10636 758 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 CCNB1P14635 433 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 AZGP1P25311 298 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 TTC23Q5W5X9 447 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 PACS1Q6VY07 963 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 DSELQ8IZU8 1212 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 ACSS3Q9H6R3 686 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMG6-201ENST00000263073 GGA2Q9UJY4 613 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 ACTL7BQ9Y614 415 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 RBAK-RBAKDNI3L0D1 243 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 OR10H3O60404 316 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 C9P02748 559 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 NCK1P16333 377 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 ZNF143P52747 638 aaPredicted RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 STXBP5Q5T5C0 1151 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 CLEC6AQ6EIG7 209 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 C12orf56Q8IXR9 622 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 STAG3L4Q8TBR4 150 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 CRNNQ9UBG3 495 aaPredicted RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 UBA2Q9UBT2 640 aaPredicted RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 WBP11Q9Y2W2 641 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 TULP2O00295 520 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 SNAP91O60641 907 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 TCEA3O75764 348 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 PRG2P13727 222 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 GTF2E2P29084 291 aaKnown RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 MTHFRP42898 656 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 TGFB2P61812 414 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 CBX3Q13185 183 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 CRTC3Q6UUV7 619 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 LDB1Q86U70 411 aaPredicted RBP12.13□□□□□ -0.47
SMG6-201ENST00000263073 C3orf18Q9UK00 162 aa12.13□□□□□ -0.47
SMG6-201ENST00000263073 A0A0J9YYE9 177 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 E7ENX8 843 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 H7C4K7 107 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 CCNKO75909 580 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
SMG6-201ENST00000263073 OR6A2O95222 327 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ATP5BP06576 529 aaKnown RBP12.12□□□□□ -0.47
SMG6-201ENST00000263073 ABHD2P08910 425 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 FOSL2P15408 326 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 SLC25A24Q6NUK1 477 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 TRAPPC5Q8IUR0 188 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 MCFD2Q8NI22 146 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ADI1Q9BV57 179 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 SLITRK2Q9H156 845 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 CHRM5P08912 532 aaPredicted RBP12.12□□□□□ -0.47
SMG6-201ENST00000263073 PAEPP09466 180 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ICAM3P32942 547 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 CCNFP41002 786 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 PFKPQ01813 784 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 PLD1Q13393 1074 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 MZT2AQ6P582 158 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 REPS2Q8NFH8 660 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 PIGKQ92643 395 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 MYDGFQ969H8 173 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ASB8Q9H765 288 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 NPEPPSL1A6NEC2 478 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 GMFGO60234 142 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ERBB2P04626 1255 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 BPGMP07738 259 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 BCL2L1Q07817 233 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 BNIP1Q12981 228 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 VPS26BQ4G0F5 336 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 PHF10Q8WUB8 498 aaKnown RBP12.12□□□□□ -0.47
SMG6-201ENST00000263073 EZH1Q92800 747 aaPredicted RBP12.12□□□□□ -0.47
SMG6-201ENST00000263073 PPP1R14BQ96C90 147 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 PPM1MQ96MI6 270 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 SLC9A7Q96T83 725 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms