RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 FAM83EQ2M2I3 478 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 VPS26BQ4G0F5 336 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 MTG1Q9BT17 334 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 MRPL46Q9H2W6 279 aaKnown RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 RPF2Q9H7B2 306 aaKnown RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 TCRBV3S1A0A5B6 114 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 CLOCKO15516 846 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 CAPNS1P04632 268 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 TXNP10599 105 aaKnown RBP16.02■□□□□ 0.16
LMNB1-201ENST00000261366 NCK1P16333 377 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 HMOX2P30519 316 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 CD97P48960 835 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 CREB5Q02930 508 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 ZIK1Q3SY52 487 aaPredicted RBP16.02■□□□□ 0.16
LMNB1-201ENST00000261366 ZNF789Q5FWF6 425 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 FBXO48Q5FWF7 155 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.16
LMNB1-201ENST00000261366 LDB1Q86U70 411 aaPredicted RBP16.02■□□□□ 0.16
LMNB1-201ENST00000261366 CUZD1Q86UP6 607 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 RETREG3Q86VR2 466 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 CROCCP3Q8IVE0 287 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 RYBPQ8N488 228 aaPredicted RBP16.02■□□□□ 0.16
LMNB1-201ENST00000261366 MAGEE2Q8TD90 523 aaPredicted RBP16.02■□□□□ 0.16
LMNB1-201ENST00000261366 PLEKHA8Q96JA3 519 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 NPLQ9BXD5 320 aaPredicted RBP16.02■□□□□ 0.16
LMNB1-201ENST00000261366 GJD2Q9UKL4 321 aa16.02■□□□□ 0.16
LMNB1-201ENST00000261366 TARM1B6A8C7 271 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 CCL22O00626 93 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 EI24O14681 340 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 BMP10O95393 424 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 C22orf31O95567 290 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 FUCA1P04066 466 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 GRM5P41594 1212 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 SLC1A2P43004 574 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 ARHGAP36Q6ZRI8 547 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 STRADAQ7RTN6 431 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 OR2T34Q8NGX1 318 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 OR2T3Q8NH03 318 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 EDEM1Q92611 657 aa16.02■□□□□ 0.15
LMNB1-201ENST00000261366 C1orf232A0A0U1RR37 186 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 TRIM43BA6NCK2 446 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ZNF487B1APH4 448 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 DFFAO00273 331 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 DLGAP1O14490 977 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 GAS2O43903 313 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 PMPCBO75439 489 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 MERTKQ12866 999 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 FUT11Q495W5 492 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 SAMD4BQ5PRF9 694 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ARHGAP17Q68EM7 881 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 NANOGP8Q6NSW7 305 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 KCTD8Q6ZWB6 473 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ZDHHC17Q8IUH5 632 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ZC3H7AQ8IWR0 971 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ALDH16A1Q8IZ83 802 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 PELI3Q8N2H9 469 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 DDHD1Q8NEL9 900 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 HM13Q8TCT9 377 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 GPR78Q96P69 363 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 EIF2AQ9BY44 585 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 SNX25Q9H3E2 840 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 HIPK3Q9H422 1215 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 CACNG4Q9UBN1 327 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 DCLK1O15075 740 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 SLC22A2O15244 555 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 SPTLC1O15269 473 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 SUPT7LO94864 414 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 CHRNA4P43681 627 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 TUBA4AP68366 448 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 RELAQ04206 551 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 OTUD3Q5T2D3 398 aaPredicted RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 PPP4R4Q6NUP7 873 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 CENPSQ8N2Z9 138 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 LRRC43Q8N309 656 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 RDH11Q8TC12 318 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 COX4I2Q96KJ9 171 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 C3orf30Q96M34 536 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 LRRC4Q9HBW1 653 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 UTP6Q9NYH9 597 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 IPO11Q9UI26 975 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ANKRD6Q9Y2G4 727 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 CORINQ9Y5Q5 1042 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 DHRS12A0PJE2 317 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 PPP6CO00743 305 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 INPP4BO15327 924 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 TSPAN1O60635 241 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ADSLP30566 484 aaPredicted RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ITGADQ13349 1161 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 PCSK7Q16549 785 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 RWDD4Q6NW29 188 aaKnown RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ERMP1Q7Z2K6 904 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 GPC2Q8N158 579 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 CHST13Q8NET6 341 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 TBC1D15Q8TC07 691 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 SEPHS2Q99611 448 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
LMNB1-201ENST00000261366 GBA3Q9H227 469 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms