RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LINC00116Q8NCU8 138 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PNMA1Q8ND90 353 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ANKS1AQ92625 1134 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TBC1D20Q96BZ9 403 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ISOC1Q96CN7 298 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TWNKQ96RR1 684 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 WACQ9BTA9 647 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 RIOK2Q9BVS4 552 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 RNF26Q9BY78 433 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 VPS54Q9P1Q0 977 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 KCNJ14Q9UNX9 436 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 NUMBLQ9Y6R0 609 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PRSS47A8MTI9 375 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TO15178 435 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 FASP25445 335 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ARCN1P48444 511 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 C1QBPQ07021 282 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 AGAP7PQ5VUJ5 663 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 USP49Q70CQ1 688 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 C8orf59Q8N0T1 100 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 FNDC5Q8NAU1 212 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 OR4D10Q8NGI6 311 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 RIT1Q92963 219 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 MYLPFQ96A32 169 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 STRBPQ96SI9 672 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 C7orf25Q9BPX7 421 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PRRG3Q9BZD7 231 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 HDHD2Q9H0R4 259 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PHF11Q9UIL8 331 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 STXBP5LQ9Y2K9 1186 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 NCF1BA6NI72 391 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 NCF1CA8MVU1 366 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 E7ENX8 843 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 NDUFS8O00217 210 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 DARSP14868 501 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PEX2P28328 305 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ALX1Q15699 326 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ECHDC2Q86YB7 292 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 JAMLQ86YT9 394 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SULF1Q8IWU6 871 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 BLIDQ8IZY5 108 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 UBE2J2Q8N2K1 259 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FATE1Q969F0 183 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 E2F7Q96AV8 911 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 EXOSC8Q96B26 276 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PRICKLE1Q96MT3 831 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 TGIF2Q9GZN2 237 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CEP72Q9P209 647 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM221BA6H8Z2 402 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ORC5O43913 435 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 LIFRP42702 1097 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 GSTM5P46439 218 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ITGA1P56199 1179 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 TWF1Q12792 350 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 TCP10Q12799 353 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SMAD1Q15797 465 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 GPR162Q16538 588 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PDIK1LQ8N165 341 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 NANPQ8TBE9 248 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF431Q8TF32 576 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 C3orf49Q96BT1 292 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 EXOC2Q96KP1 924 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 S100A13Q99584 98 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 UCK2Q9BZX2 261 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SSR3Q9UNL2 185 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF609O15014 1411 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 POTEMA6NI47 508 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM13AO94988 1023 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ACADLP28330 430 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PTPN6P29350 595 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CERKLQ49MI3 558 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ASPRV1Q53RT3 343 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 C2CD6Q53TS8 623 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 RAB12Q6IQ22 244 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 POTEGQ6S5H5 508 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PSD4Q8NDX1 1056 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CHURC1Q8WUH1 139 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 GTF2H4Q92759 462 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CADM1Q9BY67 442 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 TIGARQ9NQ88 270 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZSCAN32Q9NX65 697 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNHIT2Q9UHR6 403 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 NDUFAF1Q9Y375 327 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 A0A1W2PPW3 197 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 B4GAT1O43505 415 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PDGFRAP16234 1089 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SCNN1DP51172 638 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CDH11P55287 796 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ARL4CP56559 192 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 BCL2A1Q16548 175 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PIWIL4Q7Z3Z4 852 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 OXR1Q8N573 874 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PCYOX1LQ8NBM8 494 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 LEMD2Q8NC56 503 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 BPIFB6Q8NFQ5 453 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 OR2L5Q8NG80 312 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ADAMTS16Q8TE57 1224 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms