RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 HCAR2Q8TDS4 363 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 KRT35Q92764 455 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 RAB7BQ96AH8 199 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 FEM1CQ96JP0 617 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 SERAC1Q96JX3 654 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 ZNF641Q96N77 438 aaPredicted RBP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 SLC6A18Q96N87 628 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TSGA13Q96PP4 275 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 NUDCD1Q96RS6 583 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TUBGCP5Q96RT8 1024 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 RTKNQ9BST9 563 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TMEM9BQ9NQ34 198 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 AASDHPPTQ9NRN7 309 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 DKK3Q9UBP4 350 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 GGT7Q9UJ14 662 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 TPX2Q9ULW0 747 aaKnown RBP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 ITM2BQ9Y287 266 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 ANKRD6Q9Y2G4 727 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.61□□□□□ -1.03
TMEM258-201ENST00000257262 PCDHA3Q9Y5H8 950 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 SNX11Q9Y5W9 270 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 DOCK9Q9BZ29 2069 aa8.61□□□□□ -1.03
TMEM258-201ENST00000257262 LAMA1P25391 3075 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 A0A1W2PR77 199 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 DCDC2BA2VCK2 349 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 GRID2IPA4D2P6 1211 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 PRAMEF26H0Y7S4 382 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 NEMP1O14524 444 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TRAFD1O14545 582 aaPredicted RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TM4SF5O14894 197 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 AREL1O15033 823 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 VILLO15195 856 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 SLC31A1O15431 190 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 SPINT1O43278 529 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TSPAN6O43657 245 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 CST8O60676 142 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 PAK4O96013 591 aaPredicted RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 PRKCGP05129 697 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 CCNB1P14635 433 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ZFXP17010 805 aaPredicted RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 CR2P20023 1033 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 MX2P20592 715 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 CD38P28907 300 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 SERPINA4P29622 427 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 CTNNA1P35221 906 aaKnown RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 HSPA9P38646 679 aaKnown RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 GRIA4P48058 902 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 PEX5P50542 639 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 COPS2P61201 443 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 RPS21P63220 83 aaKnown RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ADCY2Q08462 1091 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ITKQ08881 620 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 GRIK2Q13002 908 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 PUM1Q14671 1186 aaKnown RBP eCLIP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 STAT4Q14765 748 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TEAD4Q15561 434 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TAZQ16635 292 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 UGP2Q16851 508 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 KIF19Q2TAC6 998 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 HLA-BQ31612 363 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 UAP1L1Q3KQV9 507 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TMEM259Q4ZIN3 620 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 SETMARQ53H47 684 aaPredicted RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TFDP3Q5H9I0 405 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 FAM182AQ5T1J6 154 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 NAPEPLDQ6IQ20 393 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 KIAA1161Q6NSJ0 714 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 B4GALNT4Q76KP1 1039 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ADAT2Q7Z6V5 191 aaKnown RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 NT5DC3Q86UY8 548 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ZSWIM9Q86XI8 627 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 CCDC50Q8IVM0 306 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 CCDC13Q8IYE1 715 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 TXLNBQ8N3L3 684 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 LRRC57Q8N9N7 239 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 EXD1Q8NHP7 514 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 MAML1Q92585 1016 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 HDAC11Q96DB2 347 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ECHDC3Q96DC8 303 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 LGMNQ99538 433 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 MYOCQ99972 504 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 MGME1Q9BQP7 344 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 SLC17A9Q9BYT1 436 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ZDHHC5Q9C0B5 715 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 GAREM1Q9H706 876 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 ATP13A3Q9H7F0 1226 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 NOD2Q9HC29 1040 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 NT5MQ9NPB1 228 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 RBM22Q9NW64 420 aaKnown RBP eCLIP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 SAE1Q9UBE0 346 aaPredicted RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 DMTF1Q9Y222 760 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 PTPRZ1P23471 2315 aaPredicted RBP8.6□□□□□ -1.03
TMEM258-201ENST00000257262 DMXL1Q9Y485 3027 aa8.6□□□□□ -1.03
TMEM258-201ENST00000257262 hCG_1818297A0A087WSY0 165 aa8.59□□□□□ -1.03
TMEM258-201ENST00000257262 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.03
TMEM258-201ENST00000257262 TSPAN11A1L157 253 aa8.59□□□□□ -1.03
TMEM258-201ENST00000257262 CCDC66A2RUB6 948 aa8.59□□□□□ -1.03
TMEM258-201ENST00000257262 IGLON5A6NGN9 336 aa8.59□□□□□ -1.03
TMEM258-201ENST00000257262 KCNK1O00180 336 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms