RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 PDZD7Q9H5P4 517 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.01■□□□□ 0.31
SORT1-201ENST00000256637 SMIM28A0A1B0GU29 152 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 CCL22O00626 93 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 SLC28A2O43868 658 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 ATP6V1B1P15313 513 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 MAPK7Q13164 816 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 KCNK16Q96T55 309 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 CPNE1Q99829 537 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 TRHDEQ9UKU6 1024 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 MTO1Q9Y2Z2 717 aaKnown RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 CARNS1A5YM72 827 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 CPSF6Q16630 551 aaKnown RBP eCLIP17.01■□□□□ 0.31
SORT1-201ENST00000256637 FBXO30Q8TB52 745 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 ZNF473Q8WTR7 871 aaKnown RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 IL36AQ9UHA7 158 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 SAC3D1A6NKF1 404 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 FAM227AF5H4B4 570 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 MDH1P40925 334 aaKnown RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 AFTPHQ6ULP2 937 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 FAM46DQ8NEK8 389 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 PCED1BQ96HM7 432 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 NOP53Q9NZM5 478 aaKnown RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 EPHB6O15197 1021 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 EPN2O95208 641 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 PIGNO95427 931 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 GAD2Q05329 585 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 RUNX1T1Q06455 604 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 TMEM26Q6ZUK4 368 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 ZSCAN1Q8NBB4 408 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 HDAC10Q969S8 669 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 CDC42EP4Q9H3Q1 356 aaKnown RBP17.01■□□□□ 0.31
SORT1-201ENST00000256637 COL20A1Q9P218 1284 aa17.01■□□□□ 0.31
SORT1-201ENST00000256637 DENND6AQ8IWF6 608 aa17■□□□□ 0.31
SORT1-201ENST00000256637 IZUMO1Q8IYV9 350 aa17■□□□□ 0.31
SORT1-201ENST00000256637 HMCESQ96FZ2 354 aa17■□□□□ 0.31
SORT1-201ENST00000256637 HAO1Q9UJM8 370 aa17■□□□□ 0.31
SORT1-201ENST00000256637 TK2O00142 265 aa17■□□□□ 0.31
SORT1-201ENST00000256637 JMJD7P0C870 316 aa17■□□□□ 0.31
SORT1-201ENST00000256637 ADH5P11766 374 aa17■□□□□ 0.31
SORT1-201ENST00000256637 SLC13A2Q13183 592 aa17■□□□□ 0.31
SORT1-201ENST00000256637 CYP27C1Q4G0S4 372 aa17■□□□□ 0.31
SORT1-201ENST00000256637 HDHD2Q9H0R4 259 aa17■□□□□ 0.31
SORT1-201ENST00000256637 GNB5O14775 395 aa17■□□□□ 0.31
SORT1-201ENST00000256637 GCATO75600 419 aa17■□□□□ 0.31
SORT1-201ENST00000256637 ACSM2AQ08AH3 577 aa17■□□□□ 0.31
SORT1-201ENST00000256637 ACSM2BQ68CK6 577 aa17■□□□□ 0.31
SORT1-201ENST00000256637 TRIM43BA6NCK2 446 aa17■□□□□ 0.31
SORT1-201ENST00000256637 TSC22D2O75157 780 aa17■□□□□ 0.31
SORT1-201ENST00000256637 TOP3BO95985 862 aaKnown RBP17■□□□□ 0.31
SORT1-201ENST00000256637 RPL22P35268 128 aaKnown RBP17■□□□□ 0.31
SORT1-201ENST00000256637 NEK2P51955 445 aa17■□□□□ 0.31
SORT1-201ENST00000256637 KLHL35Q6PF15 583 aa17■□□□□ 0.31
SORT1-201ENST00000256637 NYAP1Q6ZVC0 841 aa17■□□□□ 0.31
SORT1-201ENST00000256637 JPH3Q8WXH2 748 aaPredicted RBP17■□□□□ 0.31
SORT1-201ENST00000256637 RIBC2Q9H4K1 309 aa17■□□□□ 0.31
SORT1-201ENST00000256637 CSKP41240 450 aa17■□□□□ 0.31
SORT1-201ENST00000256637 APTXQ7Z2E3 356 aaKnown RBP17■□□□□ 0.31
SORT1-201ENST00000256637 SCAMP5Q8TAC9 235 aa17■□□□□ 0.31
SORT1-201ENST00000256637 HAS1Q92839 578 aa17■□□□□ 0.31
SORT1-201ENST00000256637 FAM20BO75063 409 aa17■□□□□ 0.31
SORT1-201ENST00000256637 PEX11AO75192 247 aa17■□□□□ 0.31
SORT1-201ENST00000256637 TM7SF2O76062 418 aa17■□□□□ 0.31
SORT1-201ENST00000256637 FASTKQ14296 549 aaKnown RBP17■□□□□ 0.31
SORT1-201ENST00000256637 GFOD2Q3B7J2 385 aa17■□□□□ 0.31
SORT1-201ENST00000256637 SH3BP5LQ7L8J4 393 aa17■□□□□ 0.31
SORT1-201ENST00000256637 NANOGNBQ7Z5D8 188 aa17■□□□□ 0.31
SORT1-201ENST00000256637 NCSTNQ92542 709 aa17■□□□□ 0.31
SORT1-201ENST00000256637 SERPINB12Q96P63 405 aa17■□□□□ 0.31
SORT1-201ENST00000256637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17■□□□□ 0.31
SORT1-201ENST00000256637 SRMSQ9H3Y6 488 aa17■□□□□ 0.31
SORT1-201ENST00000256637 PRDM16Q9HAZ2 1276 aa17■□□□□ 0.31
SORT1-201ENST00000256637 DNAJC11Q9NVH1 559 aa17■□□□□ 0.31
SORT1-201ENST00000256637 HLA-EP13747 358 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 KELP23276 732 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 TOR4AQ9NXH8 423 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 MTF2Q9Y483 593 aaPredicted RBP16.99■□□□□ 0.31
SORT1-201ENST00000256637 PCDHA3Q9Y5H8 950 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 UBDO15205 165 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 ARHGEF9O43307 516 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 ABHD15Q6UXT9 468 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 TMPRSS9Q7Z410 1059 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
SORT1-201ENST00000256637 VGLL2Q8N8G2 317 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 VANGL1Q8TAA9 524 aaPredicted RBP16.99■□□□□ 0.31
SORT1-201ENST00000256637 LAMTOR5O43504 91 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 ITGAVP06756 1048 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 SLC9A6Q92581 669 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 MKL1Q969V6 931 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 ERGIC2Q96RQ1 377 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 C1orf50Q9BV19 199 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 KCNN2Q9H2S1 579 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 GKN1Q9NS71 199 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 ABI3Q9P2A4 366 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 USP15Q9Y4E8 981 aaPredicted RBP16.99■□□□□ 0.31
SORT1-201ENST00000256637 ARIH1Q9Y4X5 557 aaPredicted RBP16.99■□□□□ 0.31
SORT1-201ENST00000256637 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
SORT1-201ENST00000256637 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
SORT1-201ENST00000256637 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms