RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 FBXO10Q9UK96 956 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 GRID1Q9ULK0 1009 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 CUL9Q8IWT3 2517 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 VPS13AQ96RL7 3174 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 NUMA1Q14980 2115 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 SRCP12931 536 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 KRT4P19013 534 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 TARSP26639 723 aaKnown RBP12.23□□□□□ -0.45
NIP7-201ENST00000254940 HTR7P34969 479 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 RPA3P35244 121 aaPredicted RBP12.23□□□□□ -0.45
NIP7-201ENST00000254940 IL12RB1P42701 662 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 SCNN1BP51168 640 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 GEMIN4P57678 1058 aaKnown RBP12.23□□□□□ -0.45
NIP7-201ENST00000254940 XRCC4Q13426 336 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 ZNF234Q14588 700 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 LBRQ14739 615 aaKnown RBP12.23□□□□□ -0.45
NIP7-201ENST00000254940 DLG2Q15700 870 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 TRABD2AQ86V40 505 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 CTAGE3PQ8IX95 158 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 ZNF513Q8N8E2 541 aaPredicted RBP12.23□□□□□ -0.45
NIP7-201ENST00000254940 RPLP0P6Q8NHW5 317 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 MRGPRX3Q96LB0 322 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 SIGLEC10Q96LC7 697 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 CCDC77Q9BR77 488 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 MLPHQ9BV36 600 aaPredicted RBP12.23□□□□□ -0.45
NIP7-201ENST00000254940 GON4LQ3T8J9 2241 aa12.23□□□□□ -0.45
NIP7-201ENST00000254940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 ZNF487B1APH4 448 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 TCEA3O75764 348 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 KLF8O95600 359 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 C1QAP02745 245 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 PRKCGP05129 697 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 ABHD2P08910 425 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 NFKB1P19838 968 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 MX2P20592 715 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 GRIA2P42262 883 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 ZNF135P52742 658 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 YBEYP58557 167 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 RHOAP61586 193 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 ZNF235Q14590 738 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 SERPINA13PQ6UXR4 307 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 UNC5AQ6ZN44 842 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 LRRC34Q8IZ02 419 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 DCAF4L2Q8NA75 395 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 PDCD6IPQ8WUM4 868 aaKnown RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 DCAKDQ8WVC6 231 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 HDAC11Q96DB2 347 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 THOC1Q96FV9 657 aaKnown RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 TTC25Q96NG3 672 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 CINPQ9BW66 212 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 FOXP3Q9BZS1 431 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 SLC2A4RGQ9NR83 387 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 EVLQ9UI08 416 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 SLC25A13Q9UJS0 675 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 PLA2G4CQ9UP65 541 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 CFAP69A5D8W1 941 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 FAM170BA6NMN3 283 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 TOP3BO95985 862 aaKnown RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 EPHX1P07099 455 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 MGAT1P26572 445 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 WDR4P57081 412 aaKnown RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 PFKPQ01813 784 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 GRSF1Q12849 480 aaKnown RBP eCLIP12.22□□□□□ -0.45
NIP7-201ENST00000254940 BMPR2Q13873 1038 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 TMEM31Q5JXX7 168 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 MARC1Q5VT66 337 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 RNF43Q68DV7 783 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 KIAA1211LQ6NV74 962 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 TAOK1Q7L7X3 1001 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 RALGPS2Q86X27 583 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 TXNDC5Q8NBS9 432 aaKnown RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 OR52K1Q8NGK4 314 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 MYO19Q96H55 970 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 ZNF317Q96PQ6 595 aaPredicted RBP12.22□□□□□ -0.45
NIP7-201ENST00000254940 ACSS3Q9H6R3 686 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 TBC1D17Q9HA65 648 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 GGT7Q9UJ14 662 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 CACNA1IQ9P0X4 2223 aa12.22□□□□□ -0.45
NIP7-201ENST00000254940 A8MX80 341 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 MATN3O15232 486 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 PMPCBO75439 489 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 PIGNO95427 931 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 DLDP09622 509 aaKnown RBP12.21□□□□□ -0.45
NIP7-201ENST00000254940 PXNP49023 591 aaPredicted RBP12.21□□□□□ -0.45
NIP7-201ENST00000254940 SERPINH1P50454 418 aaKnown RBP12.21□□□□□ -0.45
NIP7-201ENST00000254940 IL10RBQ08334 325 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 ACBD5Q5T8D3 534 aaPredicted RBP12.21□□□□□ -0.45
NIP7-201ENST00000254940 DYDC1Q8WWB3 177 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 DNASE1L2Q92874 299 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 SERAC1Q96JX3 654 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 ZNF778Q96MU6 729 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 TRABDQ9H4I3 376 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 ZDHHC6Q9H6R6 413 aa12.21□□□□□ -0.45
NIP7-201ENST00000254940 LMAN1LQ9HAT1 526 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms