RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CYBBP04839 570 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 GP5P40197 560 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 MPP7Q5T2T1 576 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 ATXN7L2Q5T6C5 722 aaPredicted RBP19.05■□□□□ 0.64
TRIM47-201ENST00000254816 PDPK2PQ6A1A2 396 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 ZNF449Q6P9G9 518 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 DCAF4L2Q8NA75 395 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 FIBINQ8TAL6 211 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 BLOC1S5Q8TDH9 187 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 ALKBH8Q96BT7 664 aaKnown RBP19.05■□□□□ 0.64
TRIM47-201ENST00000254816 SMIM14Q96QK8 99 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 IGFLR1Q9H665 355 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 MRM3Q9HC36 420 aaKnown RBP19.05■□□□□ 0.64
TRIM47-201ENST00000254816 KIAA1522Q9P206 1035 aaPredicted RBP19.05■□□□□ 0.64
TRIM47-201ENST00000254816 CDH22Q9UJ99 828 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 INTS6Q9UL03 887 aaKnown RBP19.05■□□□□ 0.64
TRIM47-201ENST00000254816 ARL2BPQ9Y2Y0 163 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 WNT6Q9Y6F9 365 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 HEATR9A2RTY3 570 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 CCL22O00626 93 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 SMAD6O43541 496 aaKnown RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 BUD23O43709 281 aaKnown RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 TOP3BO95985 862 aaKnown RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 ARCN1P48444 511 aaKnown RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 SLC18A1P54219 525 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 GRTP1Q5TC63 336 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 CYB5D1Q6P9G0 228 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 ST13P5Q8NFI4 369 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 PTCD2Q8WV60 388 aaKnown RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 NUDCD1Q96RS6 583 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 TRIB3Q96RU7 358 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 RBBP8Q99708 897 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 PITPNM3Q9BZ71 974 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 ABCB8Q9NUT2 735 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 ZNF197O14709 1029 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 TPP1O14773 563 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 ZWINTO95229 277 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 ALDOAP04075 364 aaKnown RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 PDHA1P08559 390 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 NEK3P51956 506 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 RHOAP61586 193 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 PTPRCAPQ14761 206 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 TSTD2Q5T7W7 516 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 ASTLQ6HA08 431 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 DENND6AQ8IWF6 608 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 C2orf49Q9BVC5 232 aaPredicted RBP19.04■□□□□ 0.64
TRIM47-201ENST00000254816 TM6SF2Q9BZW4 377 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 SLCO1B3Q9NPD5 702 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 MSRAQ9UJ68 235 aa19.04■□□□□ 0.64
TRIM47-201ENST00000254816 WDR91A4D1P6 747 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 COPEO14579 308 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 HLA-DPA1P20036 260 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 CNTFP26441 200 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 HLA-FP30511 346 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 GMPRP36959 345 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 CTSOP43234 321 aaPredicted RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 CTBP1Q13363 440 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 PLEKHG6Q3KR16 790 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 INO80DQ53TQ3 878 aaPredicted RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 HHATQ5VTY9 493 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 OR6K2Q8NGY2 324 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 PDCD6IPQ8WUM4 868 aaKnown RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 RPL10LQ96L21 214 aaKnown RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 LRRC3BQ96PB8 259 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 RANBP9Q96S59 729 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 BBS2Q9BXC9 721 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 MTO1Q9Y2Z2 717 aaKnown RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 ARL5AQ9Y689 179 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 PRRC2BQ5JSZ5 2229 aaKnown RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 FGF1P05230 155 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 GSTA1P08263 222 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 TMPRSS15P98073 1019 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 MPP1Q00013 466 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 PDE1BQ01064 536 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 USP4Q13107 963 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 SEPT7Q16181 437 aaKnown RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 NDUFAF2Q8N183 169 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 PNPLA1Q8N8W4 532 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 ACVR1CQ8NER5 493 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 OR13J1Q8NGT2 312 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 RMDN1Q96DB5 314 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 FAM111AQ96PZ2 611 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 SRPK1Q96SB4 655 aaKnown RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 TDRD1Q9BXT4 1180 aaKnown RBP19.03■□□□□ 0.64
TRIM47-201ENST00000254816 SLC28A3Q9HAS3 691 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 RAI2Q9Y5P3 530 aa19.03■□□□□ 0.64
TRIM47-201ENST00000254816 VGLL3A8MV65 326 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 LDB2O43679 373 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 NDST3O95803 873 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 PRLP01236 227 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 EPOP01588 193 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 CCNFP41002 786 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 MNAT1P51948 309 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 PTPRRQ15256 657 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 LY6G5CQ5SRR4 150 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 RNF43Q68DV7 783 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 TIFABQ6ZNK6 161 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 CMC1Q7Z7K0 106 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms