RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 IGLV3-10A0A075B6K4 115 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 FAM92AA1XBS5 289 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 SORBS2O94875 1100 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 PIGNO95427 931 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 ACRP10323 421 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 PAMP19021 973 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 COPAP53621 1224 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 DEFB103AP81534 67 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 TSTD2Q5T7W7 516 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 SNX30Q5VWJ9 437 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 LDB1Q86U70 411 aaPredicted RBP18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 ATP6V0D2Q8N8Y2 350 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 OR13J1Q8NGT2 312 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 STMN2Q93045 179 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 TOP1MTQ969P6 601 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 DRC3Q9H069 523 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 FAM96AQ9H5X1 160 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 ATP13A1Q9HD20 1204 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 A0A088AWK7 358 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 ABHD14A-ACY1A0A1B0GW23 586 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 JUNP05412 331 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 APOA4P06727 396 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 SERPINH1P50454 418 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 CLNS1AP54105 237 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 ELAVL2Q12926 359 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 DUSP4Q13115 394 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 TRIM68Q6AZZ1 485 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 NADSYN1Q6IA69 706 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 PPP1R2P1Q96PQ5 205 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 OLFM1Q99784 485 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 ILKAPQ9H0C8 392 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 C1orf21Q9H246 121 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 ZDHHC2Q9UIJ5 367 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 G3BP2Q9UN86 482 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 KCTD3Q9Y597 815 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 EIF4E1BA6NMX2 242 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 EPHA3P29320 983 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 MSLNQ13421 630 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 SPOUT1Q5T280 376 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 FRMD7Q6ZUT3 714 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 TMC7Q7Z402 723 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 PTAR1Q7Z6K3 402 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 LSMEM2Q8N112 164 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 CFAP52Q8N1V2 620 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 RDH11Q8TC12 318 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 HEXDCQ8WVB3 486 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 FAM167BQ9BTA0 163 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 TTPALQ9BTX7 342 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 CWH43Q9H720 699 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 CYP4F11Q9HBI6 524 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 TLR8Q9NR97 1041 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 CLIC5Q9NZA1 410 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 UXTQ9UBK9 157 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 MTF2Q9Y483 593 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 ACTL7AQ9Y615 435 aa18.85■□□□□ 0.61
PDLIM4-201ENST00000253754 HEATR9A2RTY3 570 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 NEMP2A6NFY4 417 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 OR51F1A6NGY5 319 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 OR6C75A6NL08 312 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 MATN2O00339 956 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 KIAA0355O15063 1070 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 RAMP2O60895 175 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 H2AFYO75367 372 aaKnown RBP18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 ARSDP51689 593 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 KCNQ1P51787 676 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 POLD3Q15054 466 aaPredicted RBP18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 SIRPB2Q5JXA9 342 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 PRSS55Q6UWB4 352 aaPredicted RBP18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 CCNYL1Q8N7R7 359 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 ARRDC2Q8TBH0 407 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 NAF1Q96HR8 494 aaKnown RBP18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 NUF2Q9BZD4 464 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 PRKD2Q9BZL6 878 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 ARNT2Q9HBZ2 717 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 NMRK1Q9NWW6 199 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 FNIP2Q9P278 1114 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 MID2Q9UJV3 735 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 LRRC42Q9Y546 428 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 CLGNO14967 610 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 MUSKO15146 869 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 PDE5AO76074 875 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 OR1E1P30953 314 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 COL13A1Q5TAT6 717 aaPredicted RBP18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 C1orf146Q5VVC0 180 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 NET1Q7Z628 596 aaPredicted RBP18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 EFCAB3Q8N7B9 438 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 CFAP61Q8NHU2 1237 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 TCF7L2Q9NQB0 619 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 STOML1Q9UBI4 398 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 RAP2CQ9Y3L5 183 aa18.84■□□□□ 0.61
PDLIM4-201ENST00000253754 TMEM233B4DJY2 109 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 GRID2O43424 1007 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 BUD23O43709 281 aaKnown RBP18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 CIB2O75838 187 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 IGLV3-27P01718 113 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 MYL4P12829 197 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 CRABP2P29373 138 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 RPL14P50914 215 aaKnown RBP18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 SLC34A1Q06495 639 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms