RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF135P52742 658 aaPredicted RBP25.73■■□□□ 1.71
RAB40C-201ENST00000248139 TMEM207Q6UWW9 146 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 SATL1Q86VE3 508 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 RTL3Q8N8U3 475 aaKnown RBP25.73■■□□□ 1.71
RAB40C-201ENST00000248139 FBRSL1Q9HCM7 1045 aaKnown RBP25.73■■□□□ 1.71
RAB40C-201ENST00000248139 CLIC5Q9NZA1 410 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 MARCH4Q9P2E8 410 aaPredicted RBP25.73■■□□□ 1.71
RAB40C-201ENST00000248139 IQCA1LA6NCM1 817 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 ME2P23368 584 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 ATP5F1P24539 256 aaPredicted RBP25.73■■□□□ 1.71
RAB40C-201ENST00000248139 YWHAQP27348 245 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 GSTT1P30711 240 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 GRK4P32298 578 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 SPPL2BQ8TCT7 592 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 SMOC2Q9H3U7 446 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 ALG9Q9H6U8 611 aa25.73■■□□□ 1.71
RAB40C-201ENST00000248139 CAPN15O75808 1086 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 HMBSP08397 361 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 PMLP29590 882 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 TECRLQ5HYJ1 363 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 UGT2A3Q6UWM9 527 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 APLFQ8IW19 511 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-201ENST00000248139 ST13P4Q8IZP2 240 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-201ENST00000248139 RYBPQ8N488 228 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-201ENST00000248139 CNBD2Q96M20 576 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 C15orf38-AP3S2A0A0A6YYH1 394 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 ZNF189O75820 626 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-201ENST00000248139 SOAT2O75908 522 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 PEX11BO96011 259 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 PIRTP0C851 137 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 PAMP19021 973 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 CDKN2DP55273 166 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 CDH13P55290 713 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 TSPY1Q01534 308 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 BRMS1LQ5PSV4 323 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 GPR158Q5T848 1215 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 KIAA0930Q6ICG6 404 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-201ENST00000248139 KDELC1Q6UW63 502 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 ARPINQ7Z6K5 226 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 GALNT15Q8N3T1 639 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 OR13J1Q8NGT2 312 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 CEP70Q8NHQ1 597 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 HDAC10Q969S8 669 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 PSMG2Q969U7 264 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 CCDC28BQ9BUN5 200 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 SEMA6AQ9H2E6 1030 aa25.72■■□□□ 1.71
RAB40C-201ENST00000248139 FGF10O15520 208 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-201ENST00000248139 DNAJA2O60884 412 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 CTGFP29279 349 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 NME5P56597 212 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 USP46P62068 366 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 C6orf52Q5T4I8 152 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 ATP6V1E2Q96A05 226 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 SLC39A3Q9BRY0 314 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 TRIM4Q9C037 500 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 GIMAP2Q9UG22 337 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 RIMS3Q9UJD0 308 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 LAMA3Q16787 3333 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 E7ENX8 843 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 SLCO1B7G3V0H7 640 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PPP6CO00743 305 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 UBFD1O14562 309 aaKnown RBP25.71■■□□□ 1.71
RAB40C-201ENST00000248139 DNAJB2P25686 324 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 HOXC13P31276 330 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 ZNF33AQ06730 810 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PTK2BQ14289 1009 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 AGKQ53H12 422 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PAOXQ6QHF9 649 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PIWIL4Q7Z3Z4 852 aaKnown RBP25.71■■□□□ 1.71
RAB40C-201ENST00000248139 CUZD1Q86UP6 607 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 TTC9BQ8N6N2 239 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 SPATA16Q9BXB7 569 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 APPL1Q9UKG1 709 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PTGDR2Q9Y5Y4 395 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 GPR182O15218 404 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 MLLT6P55198 1093 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-201ENST00000248139 POU4F1Q01851 419 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PDAP1Q13442 181 aaKnown RBP25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PSMD5Q16401 504 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 FAM83EQ2M2I3 478 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 PITRM1Q5JRX3 1037 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 ZNF280BQ86YH2 543 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 MIB1Q86YT6 1006 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 OR52K2Q8NGK3 314 aa25.71■■□□□ 1.71
RAB40C-201ENST00000248139 MTG1Q9BT17 334 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-201ENST00000248139 TRPM7Q96QT4 1865 aa25.7■■□□□ 1.71
RAB40C-201ENST00000248139 LAMA2P24043 3122 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 C9JVG2 144 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 NPHS1O60500 1241 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 RNASEH2AO75792 299 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 CSPG5O95196 566 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 AKR1A1P14550 325 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 CYP2C18P33260 490 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 PRKAA2P54646 552 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 TRIM32Q13049 653 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 ADGRE1Q14246 886 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 FBXO48Q5FWF7 155 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 HECTD2Q5U5R9 776 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 CWF19L1Q69YN2 538 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 THEM5Q8N1Q8 247 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms