RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 MKS1Q9NXB0 559 aa18.1■□□□□ 0.49
KLHDC3-201ENST00000244670 KIAA1522Q9P206 1035 aaPredicted RBP18.1■□□□□ 0.49
KLHDC3-201ENST00000244670 LHX3Q9UBR4 397 aa18.1■□□□□ 0.49
KLHDC3-201ENST00000244670 CDH22Q9UJ99 828 aa18.1■□□□□ 0.49
KLHDC3-201ENST00000244670 USP15Q9Y4E8 981 aaPredicted RBP18.1■□□□□ 0.49
KLHDC3-201ENST00000244670 HEATR9A2RTY3 570 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 ALDOAP04075 364 aaKnown RBP18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 ITGA2BP08514 1039 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 GP5P40197 560 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 USP4Q13107 963 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 RAB30Q15771 203 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 SPRED3Q2MJR0 410 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 PLEKHG6Q3KR16 790 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 ATXN7L2Q5T6C5 722 aaPredicted RBP18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 PDPK2PQ6A1A2 396 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 SPATA21Q7Z572 469 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 BLOC1S5Q8TDH9 187 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 PTCD2Q8WV60 388 aaKnown RBP18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 NUDCD1Q96RS6 583 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 CPNE1Q99829 537 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 GDF15Q99988 308 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 BBS2Q9BXC9 721 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 PITPNM3Q9BZ71 974 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 TM6SF2Q9BZW4 377 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 TREX1Q9NSU2 369 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 PRKAG3Q9UGI9 489 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 INTS6Q9UL03 887 aaKnown RBP18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 PCDHGC4Q9Y5F7 938 aa18.09■□□□□ 0.49
KLHDC3-201ENST00000244670 SMAD6O43541 496 aaKnown RBP18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 TOP3BO95985 862 aaKnown RBP18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 FGF1P05230 155 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 POU2F2P09086 479 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 HLA-DPA1P20036 260 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 ARNTP27540 789 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 HLA-FP30511 346 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 INO80DQ53TQ3 878 aaPredicted RBP18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 RARS2Q5T160 578 aaKnown RBP18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 ST13P5Q8NFI4 369 aaPredicted RBP18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 PTPRN2Q92932 1015 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 TRIB3Q96RU7 358 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 SLC13A1Q9BZW2 595 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 VPS11Q9H270 941 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 PHTF1Q9UMS5 762 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 KCTD3Q9Y597 815 aa18.08■□□□□ 0.49
KLHDC3-201ENST00000244670 CCL22O00626 93 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 BUD23O43709 281 aaKnown RBP18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 EDF1O60869 148 aaKnown RBP18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 CTSOP43234 321 aaPredicted RBP18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 ARCN1P48444 511 aaKnown RBP18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 RNF43Q68DV7 783 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 ASTLQ6HA08 431 aaPredicted RBP18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 RETSATQ6NUM9 610 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 NDUFAF2Q8N183 169 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 PDCD6IPQ8WUM4 868 aaKnown RBP18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 IRF7Q92985 503 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 RMDN1Q96DB5 314 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 SMIM14Q96QK8 99 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 RANBP9Q96S59 729 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 RBBP8Q99708 897 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 TDRD1Q9BXT4 1180 aaKnown RBP18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 LMAN2LQ9H0V9 348 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 SFXN1Q9H9B4 322 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 PLLPQ9Y342 182 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 RAI2Q9Y5P3 530 aa18.08■□□□□ 0.48
KLHDC3-201ENST00000244670 NUP210Q8TEM1 1887 aaPredicted RBP18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 SOBPA7XYQ1 873 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 TPP1O14773 563 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 FSBPO95073 299 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 NDST3O95803 873 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 PDHA1P08559 390 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 PDE1BQ01064 536 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 PITRM1Q5JRX3 1037 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 LY6G5CQ5SRR4 150 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 TSTD2Q5T7W7 516 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 GRTP1Q5TC63 336 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 DENND6AQ8IWF6 608 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 LPCAT1Q8NF37 534 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 OR6K2Q8NGY2 324 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 CCT6BQ92526 530 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 RPL10LQ96L21 214 aaKnown RBP18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 LRRC3BQ96PB8 259 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 IQCGQ9H095 443 aaKnown RBP18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 SPHK2Q9NRA0 654 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 ARL5AQ9Y689 179 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 CAPN7Q9Y6W3 813 aa18.07■□□□□ 0.48
KLHDC3-201ENST00000244670 PENKP01210 267 aaPredicted RBP18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 EPOP01588 193 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 TYRP14679 529 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 PAMP19021 973 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 VIPR2P41587 438 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 SERPINB4P48594 390 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 STK19P49842 368 aaPredicted RBP18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 TRAF2Q12933 501 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 CTBP1Q13363 440 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 KCNC3Q14003 757 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 PTPRCAPQ14761 206 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 FUT11Q495W5 492 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 KIAA0930Q6ICG6 404 aaPredicted RBP18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 OR13J1Q8NGT2 312 aa18.06■□□□□ 0.48
KLHDC3-201ENST00000244670 ACDQ96AP0 544 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms