RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 MMP20O60882 483 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 GLI1P08151 1106 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 ITGB6P18564 788 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 ITIH2P19823 946 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 CASP14P31944 242 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 NOS2P35228 1153 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 SERPINH1P50454 418 aaKnown RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 MAPK10P53779 464 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 INHBCP55103 352 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 JAM2P57087 298 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 ARF5P84085 180 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 PTK2BQ14289 1009 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 C5orf22Q49AR2 442 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 MANEAQ5SRI9 462 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 OLFML1Q6UWY5 402 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 LRRC31Q6UY01 552 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 SETD3Q86TU7 594 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 ZFAND4Q86XD8 727 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 PTRH1Q86Y79 214 aaKnown RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 HID1Q8IV36 788 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 ZNF683Q8IZ20 524 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 PCDH19Q8TAB3 1148 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 LIN37Q96GY3 246 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 STRADBQ9C0K7 418 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 MBNL1Q9NR56 388 aaKnown RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 AJAP1Q9UKB5 411 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 BSNQ9UPA5 3926 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 PRAMEF33A0A0G2JMD5 474 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 NTN3O00634 580 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-201ENST00000242776 SUV39H1O43463 412 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 PRAMEF10O60809 474 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 MFAP3LO75121 409 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 UGT2B4P06133 528 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 WT1P19544 449 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-201ENST00000242776 KRT9P35527 623 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 SOX5P35711 763 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 ACVRL1P37023 503 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 EIF4A3P38919 411 aaKnown RBP13.98□□□□□ -0.17
DDX39A-201ENST00000242776 GSDMDP57764 484 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 BPIFB4P59827 614 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 SLC6A3Q01959 620 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 PPARDQ03181 441 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 DEUP1Q05D60 604 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 TBX2Q13207 712 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-201ENST00000242776 TBR1Q16650 682 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 RETSATQ6NUM9 610 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 PCDH20Q8N6Y1 951 aaKnown RBP13.98□□□□□ -0.17
DDX39A-201ENST00000242776 NETO2Q8NC67 525 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 LENG8Q96PV6 779 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-201ENST00000242776 TBCBQ99426 244 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 WRAP53Q9BUR4 548 aaKnown RBP13.98□□□□□ -0.17
DDX39A-201ENST00000242776 ASNSD1Q9NWL6 643 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 ARHGEF38Q9NXL2 777 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 COQ6Q9Y2Z9 468 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 LOXL2Q9Y4K0 774 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 LRP4O75096 1905 aa13.98□□□□□ -0.17
DDX39A-201ENST00000242776 UBR5O95071 2799 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-201ENST00000242776 A0A1W2PQM1 296 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 LRRC53A6NM62 1247 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 DRGXA6NNA5 263 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 D6RAR5 112 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 TSPAN6O43657 245 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 AP1G1O43747 822 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 ZMPSTE24O75844 475 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 CTSEP14091 401 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 FERP16591 822 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 ETV5P41161 510 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 MLLT3P42568 568 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-201ENST00000242776 TLE1Q04724 770 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 ASIC2Q16515 512 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 PTPN20Q4JDL3 420 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 ATXN7L2Q5T6C5 722 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-201ENST00000242776 ZNF574Q6ZN55 896 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-201ENST00000242776 FAM71AQ8IYT1 594 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 ARL10Q8N8L6 244 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 WDR48Q8TAF3 677 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 SYN2Q92777 582 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-201ENST00000242776 CENPTQ96BT3 561 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 KLHL32Q96NJ5 620 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 CEP44Q9C0F1 390 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 ZNHIT6Q9NWK9 470 aaKnown RBP13.97□□□□□ -0.17
DDX39A-201ENST00000242776 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.97□□□□□ -0.172e-7■■■□□ 15.3
DDX39A-201ENST00000242776 FOXJ2Q9P0K8 574 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 GPR34Q9UPC5 381 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 PCDHGA4Q9Y5G9 962 aa13.97□□□□□ -0.17
DDX39A-201ENST00000242776 FOXN3O00409 490 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-201ENST00000242776 GFPT2O94808 682 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 PNMA6AP0CW24 399 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-201ENST00000242776 LIPCP11150 499 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 CXCR3P49682 368 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 GNA12Q03113 381 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 PTK2Q05397 1052 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 MTA1Q13330 715 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 CLCA4Q14CN2 919 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 MEA1Q16626 185 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 ZNF805Q5CZA5 627 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 BRMS1LQ5PSV4 323 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 ENPP7Q6UWV6 458 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 TTC7BQ86TV6 843 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms