RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 IRX1P78414 480 aaPredicted RBP16.97■□□□□ 0.31
SSPN-201ENST00000242729 PTK2BQ14289 1009 aa16.97■□□□□ 0.31
SSPN-201ENST00000242729 GEN1Q17RS7 908 aa16.97■□□□□ 0.31
SSPN-201ENST00000242729 C16orf89Q6UX73 402 aa16.97■□□□□ 0.31
SSPN-201ENST00000242729 RP9Q8TA86 221 aaKnown RBP16.97■□□□□ 0.31
SSPN-201ENST00000242729 CYP2S1Q96SQ9 504 aa16.97■□□□□ 0.31
SSPN-201ENST00000242729 DNAJB4Q9UDY4 337 aa16.97■□□□□ 0.31
SSPN-201ENST00000242729 DSEQ9UL01 958 aa16.97■□□□□ 0.31
SSPN-201ENST00000242729 SIX3O95343 332 aaPredicted RBP16.96■□□□□ 0.31
SSPN-201ENST00000242729 SPATA31D3P0C874 917 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 LIN52Q52LA3 116 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 IL23RQ5VWK5 629 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 METTL21CQ5VZV1 264 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 TMEM207Q6UWW9 146 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 SPATA31D4Q6ZUB0 917 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 ST13P4Q8IZP2 240 aaPredicted RBP16.96■□□□□ 0.31
SSPN-201ENST00000242729 HMGCLL1Q8TB92 370 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 NAT14Q8WUY8 206 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 RSPH1Q8WYR4 309 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 LRCH3Q96II8 777 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 IL12RB2Q99665 862 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 NOL6Q9H6R4 1146 aaKnown RBP16.96■□□□□ 0.31
SSPN-201ENST00000242729 PRDM16Q9HAZ2 1276 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 ANKRD6Q9Y2G4 727 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 A8MT66 165 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 TNPO2O14787 897 aaKnown RBP16.96■□□□□ 0.31
SSPN-201ENST00000242729 CDKL1Q00532 357 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 FAM171BQ6P995 826 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 BLOC1S5Q8TDH9 187 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 ACBD6Q9BR61 282 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 ARHGAP39Q9C0H5 1083 aa16.96■□□□□ 0.31
SSPN-201ENST00000242729 SENP6Q9GZR1 1112 aaPredicted RBP16.96■□□□□ 0.31
SSPN-201ENST00000242729 UBFD1O14562 309 aaKnown RBP16.95■□□□□ 0.3
SSPN-201ENST00000242729 APOA4P06727 396 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 CTGFP29279 349 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 ADRA1AP35348 466 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 GEMP55040 296 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 HUNKP57058 714 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 GALNT3Q14435 633 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 UGP2Q16851 508 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 TAF2Q6P1X5 1199 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 ATAD1Q8NBU5 361 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 RPL10LQ96L21 214 aaKnown RBP16.95■□□□□ 0.3
SSPN-201ENST00000242729 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 KATNAL1Q9BW62 490 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 CATSPERBQ9H7T0 1116 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 EFCAB1Q9HAE3 211 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 TRMT13Q9NUP7 481 aaKnown RBP16.95■□□□□ 0.3
SSPN-201ENST00000242729 PSMD13Q9UNM6 376 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 NOD1Q9Y239 953 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 SLC27A5Q9Y2P5 690 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 RAD54BQ9Y620 910 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 ARL5AQ9Y689 179 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 RNASEH2AO75792 299 aaKnown RBP16.95■□□□□ 0.3
SSPN-201ENST00000242729 CRTAMO95727 393 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 ME2P23368 584 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 GPR162Q16538 588 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 FAM83EQ2M2I3 478 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 RAP1GAP2Q684P5 730 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 AMIGO2Q86SJ2 522 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 CUZD1Q86UP6 607 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 CFAP52Q8N1V2 620 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 C2CD4AQ8NCU7 369 aaPredicted RBP16.95■□□□□ 0.3
SSPN-201ENST00000242729 MYEOVQ96EZ4 313 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 KCNA7Q96RP8 456 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 TREX1Q9NSU2 369 aa16.95■□□□□ 0.3
SSPN-201ENST00000242729 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.95■□□□□ 0.3
SSPN-201ENST00000242729 UXTQ9UBK9 157 aaPredicted RBP16.95■□□□□ 0.3
SSPN-201ENST00000242729 AHCYL1O43865 530 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 GPC4O75487 556 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 CSRP3P50461 194 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 YBX1P67809 324 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 TSPY1Q01534 308 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 YWHAHQ04917 246 aaPredicted RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 HNRNPDQ14103 355 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 KLHDC9Q8NEP7 349 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 OR13J1Q8NGT2 312 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 SPPL2BQ8TCT7 592 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 C3orf30Q96M34 536 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 TBATAQ96M53 351 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 ABCC13Q9NSE7 274 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 MID2Q9UJV3 735 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 SCAMP3O14828 347 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 H2AFYO75367 372 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 RPL10P27635 214 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 PRAMEP78395 509 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 FASTKQ14296 549 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 HECTD2Q5U5R9 776 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 EXOC2Q96KP1 924 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 MRPL57Q9BQC6 102 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 SPATA16Q9BXB7 569 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 UBE2OQ9C0C9 1292 aaKnown RBP16.94■□□□□ 0.3
SSPN-201ENST00000242729 AP4B1Q9Y6B7 739 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 PRDX6P30041 224 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 PSME3P61289 254 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 CYTH1Q15438 398 aa16.94■□□□□ 0.3
SSPN-201ENST00000242729 UGT2A3Q6UWM9 527 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms