RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ROPN1LQ96C74 230 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 FRMD6Q96NE9 622 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 ERMAPQ96PL5 475 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 TDRD1Q9BXT4 1180 aaKnown RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 PPA2Q9H2U2 334 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 TRIT1Q9H3H1 467 aaKnown RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 POMKQ9H5K3 350 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 CHMP1AQ9HD42 196 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 MAGEL2Q9UJ55 1249 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 ATP6AP2A0A1C7CYW4 349 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 SOBPA7XYQ1 873 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 CYP7B1O75881 506 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 CD36P16671 472 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 MPSTP25325 297 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 RFC4P35249 363 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 NFE2L1Q14494 772 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 STARD3Q14849 445 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 ATP13A5Q4VNC0 1218 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 UNC5BQ8IZJ1 945 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 OR8K3Q8NH51 312 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 TBC1D22BQ9NU19 505 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 CUEDC1Q9NWM3 386 aaPredicted RBP12.96□□□□□ -0.34
VAMP4-201ENST00000236192 OAZ3Q9UMX2 235 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 KCNH4Q9UQ05 1017 aa12.96□□□□□ -0.34
VAMP4-201ENST00000236192 ANXA6P08133 673 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 PDIA6Q15084 440 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 FBXO30Q8TB52 745 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 EBNA1BP2Q99848 306 aaKnown RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 RACGAP1Q9H0H5 632 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 SNCAIPQ9Y6H5 919 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 TCRBV5S4A2TA0A5A2 114 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 K7ERI5 159 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 RNASEH2AO75792 299 aaKnown RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 GPX6P59796 221 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 MAMLD1Q13495 774 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 NFIL3Q16649 462 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 LZTR1Q8N653 840 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 ANGPTL6Q8NI99 470 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 DEDD2Q8WXF8 326 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 CENPIQ92674 756 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 TUT1Q9H6E5 874 aaKnown RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 NCAM2O15394 837 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 RECQL5O94762 991 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 RPS3AP61247 264 aaKnown RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 DRICH1Q6PGQ1 229 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 NOXA1Q86UR1 476 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF781Q8N8C0 355 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 Q8N9G6 341 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 DNAJB14Q8TBM8 379 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 XPNPEP1Q9NQW7 623 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 HMGXB4Q9UGU5 601 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 PLIN3O60664 434 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 UPK1BO75841 260 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 ATP6V1E1P36543 226 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 MTHFRP42898 656 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 DLG2Q15700 870 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 TYW3Q6IPR3 259 aaKnown RBP12.95□□□□□ -0.34
VAMP4-201ENST00000236192 IDO2Q6ZQW0 420 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 CADM3Q8N126 398 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 SLC22A8Q8TCC7 542 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 SNX18Q96RF0 628 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 BCL7BQ9BQE9 202 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 NECTIN3Q9NQS3 549 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 USP18Q9UMW8 372 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 POLHQ9Y253 713 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 RAD54BQ9Y620 910 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 ASTN1O14525 1302 aa12.95□□□□□ -0.34
VAMP4-201ENST00000236192 UBA6A0AVT1 1052 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 TRIM23P36406 574 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 SLC12A3P55017 1021 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 TAS2R40P59535 323 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 MVKQ03426 396 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 PAOXQ6QHF9 649 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 ARSKQ6UWY0 536 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 ZBTB33Q86T24 672 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 CHCHD4Q8N4Q1 142 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 CDC26Q8NHZ8 85 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 FBXO27Q8NI29 283 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 UTP15Q8TED0 518 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF431Q8TF32 576 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 MMP19Q99542 508 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 AGO2Q9UKV8 859 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 NUMBLQ9Y6R0 609 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 AZGP1P25311 298 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 NID2Q14112 1375 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 SELPLGQ14242 412 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 CAND1Q86VP6 1230 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 CANT1Q8WVQ1 401 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 TEKT5Q96M29 485 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 SLC38A7Q9NVC3 462 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 AP3M1Q9Y2T2 418 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms