RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 TBC1D3IA0A087WXS9 549 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3EA0A087X179 549 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3KA0A087X1G2 549 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 CFAP69A5D8W1 941 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3FA6NER0 549 aaPredicted RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 FAM47DPA6NHR8 397 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3LB9A6J9 549 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 ENC1O14682 589 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 FZD6O60353 706 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 FSBPO95073 299 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 PGLSO95336 258 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3HP0C7X1 549 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 ITPKAP23677 461 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 CD27P26842 260 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 RBL1P28749 1068 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 RPL26P61254 145 aaKnown RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 PPP2CBP62714 309 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 PPP2CAP67775 309 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 CREB5Q02930 508 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TMEM259Q4ZIN3 620 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3GQ6DHY5 549 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3CQ6IPX1 549 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TTC7BQ86TV6 843 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 HORMAD1Q86X24 394 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TBC1D3Q8IZP1 549 aaPredicted RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 DEFB119Q8N690 84 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TADA1Q96BN2 335 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 IMP4Q96G21 291 aaKnown RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 PBKQ96KB5 322 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 AGAP3Q96P47 875 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 ORAI3Q9BRQ5 295 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TDRD1Q9BXT4 1180 aaKnown RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 GLOD4Q9HC38 313 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 TTC7AQ9ULT0 858 aaPredicted RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 RPL26L1Q9UNX3 145 aaKnown RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 DMTF1Q9Y222 760 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 R3HDM2Q9Y2K5 976 aaKnown RBP19.41■□□□□ 0.7
CENPA-201ENST00000233505 PCDHGC4Q9Y5F7 938 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 RAI2Q9Y5P3 530 aa19.41■□□□□ 0.7
CENPA-201ENST00000233505 A0A1W2PPC4 97 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 TTC24A2A3L6 582 aaPredicted RBP19.4■□□□□ 0.7
CENPA-201ENST00000233505 CES2O00748 559 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 FOXD2O60548 495 aaPredicted RBP19.4■□□□□ 0.7
CENPA-201ENST00000233505 STK10O94804 968 aaKnown RBP19.4■□□□□ 0.7
CENPA-201ENST00000233505 MMP2P08253 660 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 XPAP23025 273 aaPredicted RBP19.4■□□□□ 0.7
CENPA-201ENST00000233505 NFKBIAP25963 317 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 RPS21P63220 83 aaKnown RBP19.4■□□□□ 0.7
CENPA-201ENST00000233505 SKOR1P84550 965 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 ARMC12Q5T9G4 340 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 ERAP2Q6P179 960 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 DARS2Q6PI48 645 aaKnown RBP19.4■□□□□ 0.7
CENPA-201ENST00000233505 B4GALNT4Q76KP1 1039 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 ZNF567Q8N184 647 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 RASGEF1CQ8N431 466 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 C1orf216Q8TAB5 229 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 CEP76Q8TAP6 659 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 ASB12Q8WXK4 309 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 CEP41Q9BYV8 373 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 ARRDC1-AS1Q9H2J1 176 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 USP29Q9HBJ7 922 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 PCDH12Q9NPG4 1184 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 VPS45Q9NRW7 570 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 KLHL8Q9P2G9 620 aaPredicted RBP19.4■□□□□ 0.7
CENPA-201ENST00000233505 PPIL1Q9Y3C6 166 aa19.4■□□□□ 0.7
CENPA-201ENST00000233505 A0A1W2PQU0 124 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 RIOK3O14730 519 aaKnown RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 CEP104O60308 925 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 RNGTTO60942 597 aaKnown RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 CPP00450 1065 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 FGGP02679 453 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 ATP1A1P05023 1023 aaKnown RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 GNSP15586 552 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 CD68P34810 354 aaPredicted RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 MMP12P39900 470 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 IHHQ14623 411 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 SIX1Q15475 284 aaPredicted RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 ZNF284Q2VY69 593 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 TMEM52BQ4KMG9 183 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 SETMARQ53H47 684 aaPredicted RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 HS1BP3Q53T59 392 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 PRPF39Q86UA1 669 aaKnown RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 RGL4Q8IZJ4 473 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 GPR161Q8N6U8 529 aaKnown RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 PIGKQ92643 395 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 FEM1CQ96JP0 617 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 MCCC1Q96RQ3 725 aaPredicted RBP19.39■□□□□ 0.69
CENPA-201ENST00000233505 FAM118BQ9BPY3 351 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 PHTF1Q9UMS5 762 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 SNX12Q9UMY4 172 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 PCDHB9Q9Y5E1 797 aa19.39■□□□□ 0.69
CENPA-201ENST00000233505 C5orf60A6NFR6 353 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 PRR5-ARHGAP8B1AHC4 643 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 NEMP1O14524 444 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 KCNN4O15554 427 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 LIASO43766 372 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 OPHN1O60890 802 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 PCDH8O95206 1070 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 ZNF806P0C7X5 589 aa19.38■□□□□ 0.69
CENPA-201ENST00000233505 CD86P42081 329 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms