RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LSMEM2Q8N112 164 aa9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 ARRDC4Q8NCT1 418 aa9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 WNT8BQ93098 351 aa9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 HERC2P3Q9BVR0 1158 aa9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 C1QTNF1Q9BXJ1 281 aa9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 NOL6Q9H6R4 1146 aaKnown RBP9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 LRRC4Q9HBW1 653 aa9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 WDR6Q9NNW5 1121 aaKnown RBP9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 WARS2Q9UGM6 360 aaKnown RBP9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 UBQLN1Q9UMX0 589 aaKnown RBP9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 PSMD13Q9UNM6 376 aa9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 RUVBL2Q9Y230 463 aaKnown RBP9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 FAM32AQ9Y421 112 aaKnown RBP9.49□□□□□ -0.89
HLA-DOA-201ENST00000229829 RGSL1A5PLK6 1076 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SAC3D1A6NKF1 404 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 AP3B1O00203 1094 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 HDAC3O15379 428 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 DAB1O75553 588 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 JCHAINP01591 159 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MAGP20916 626 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 RPL14P50914 215 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 NDST2P52849 883 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 LILRA4P59901 499 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 CTBP1Q13363 440 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SPIDRQ14159 915 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF423Q2M1K9 1284 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF280DQ6N043 979 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TTC33Q6PID6 262 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 LAYNQ6UX15 382 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 DENND6AQ8IWF6 608 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 KYQ8NBH2 561 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SPATA22Q8NHS9 363 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TAMM41Q96BW9 452 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SGF29Q96ES7 293 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SCYL1Q96KG9 808 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 BTBD9Q96Q07 612 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 HNRNPABQ99729 332 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 CIB1Q99828 191 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MCMBPQ9BTE3 642 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 FTHL17Q9BXU8 183 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ULBP1Q9BZM6 244 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MARCH7Q9H992 704 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ADAM28Q9UKQ2 775 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 DERAQ9Y315 318 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TIMM13Q9Y5L4 95 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ST14Q9Y5Y6 855 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 KANSL1LA0AUZ9 987 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 CFAP99D6REC4 459 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 PSMD11O00231 422 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 EIF3FO00303 357 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ESRRBO95718 433 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 AHSGP02765 367 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MPOP05164 745 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 NPR3P17342 541 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 PTPN1P18031 435 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TPI1P60174 286 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ART3Q13508 389 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 USP10Q14694 798 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 PIGGQ5H8A4 983 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 WSCD1Q658N2 575 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SEL1L3Q68CR1 1132 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 GALNT18Q6P9A2 607 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC41A1Q8IVJ1 513 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MFSD6LQ8IWD5 586 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 FSTL5Q8N475 847 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 EDEM1Q92611 657 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TSPAN18Q96SJ8 248 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 NPAS2Q99743 824 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 PKP2Q99959 881 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TPK1Q9H3S4 243 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 EHD1Q9H4M9 534 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MROH8Q9H579 483 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 EPS8L2Q9H6S3 715 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TBCCD1Q9NVR7 557 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF229Q9UJW7 825 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 PIN4Q9Y237 131 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MYRFQ9Y2G1 1151 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 A0A1W2PQ67 120 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TMEM114B3SHH9 223 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 HUS1O60921 280 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 CLIC3O95833 236 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SNAI1O95863 264 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MT-CYBP00156 380 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC35E2BP0CK96 405 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SMPD1P17405 629 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 PRDX6P30041 224 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 TPTEP56180 551 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 MPP1Q00013 466 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 FGD3Q5JSP0 725 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 NOTUMQ6P988 496 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 ARHGAP36Q6ZRI8 547 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 DCDC5Q6ZRR9 648 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 RPS27LQ71UM5 84 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 CEP97Q8IW35 865 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 CENPLQ8N0S6 344 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SIX6OS1Q8N1H7 587 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 SNX31Q8N9S9 440 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 PDZD8Q8NEN9 1154 aa9.48□□□□□ -0.89
HLA-DOA-201ENST00000229829 CYGBQ8WWM9 190 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms