RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 OR52K1Q8NGK4 314 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZFAND2BQ8WV99 257 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 SMG7Q92540 1137 aaKnown RBP11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 TCEAL4Q96EI5 215 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 BFARQ9NZS9 450 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 RWDD3Q9Y3V2 267 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 A0A0D9SEW6 157 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 ALOX15BO15296 676 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 MTSS1O43312 755 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 SAT1P21673 171 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 PTPN3P26045 913 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 PAFAH1B3Q15102 231 aaKnown RBP11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 TEX44Q53QW1 395 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 MSANTD2Q6P1R3 559 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 C16orf46Q6P387 395 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 ELMSAN1Q6PJG2 1045 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 LINGO4Q6UY18 593 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 BBS5Q8N3I7 341 aa11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
TNFAIP1-201ENST00000226225 C1RP00736 705 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 RHOQP17081 205 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 NELFEP18615 380 aaKnown RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 GMPRP36959 345 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 ZNF135P52742 658 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 PDE1BQ01064 536 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 ZBTB17Q13105 803 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 TEAD2Q15562 447 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 MARK2Q7KZI7 788 aaKnown RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 NUDCD3Q8IVD9 361 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 RNF148Q8N7C7 305 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 BANPQ8N9N5 519 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 CLP1Q92989 425 aaKnown RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 SKA1Q96BD8 255 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 FNIP2Q9P278 1114 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 AGO1Q9UL18 857 aaKnown RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 KLKB1P03952 638 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 PROCP04070 461 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 ABHD2P08910 425 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 PTPN2P17706 415 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 MGAT1P26572 445 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 FDFT1P37268 417 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 GRIA2P42262 883 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 HCAR3P49019 387 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 BEND5Q7L4P6 421 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 TDRD5Q8NAT2 981 aaKnown RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 OR6Y1Q8NGX8 325 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 ATXN7L3BQ96GX2 97 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 PHACTR1Q9C0D0 580 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 GRIP2Q9C0E4 1043 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 HCFC2Q9Y5Z7 792 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 CYBBP04839 570 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 RHOP08100 348 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 F7P08709 466 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 OXCT1P55809 520 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 ADGRF1Q5T601 910 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 RNF219Q5W0B1 726 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 TMPRSS6Q8IU80 811 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 NAT16Q8N8M0 369 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 PPP2R3CQ969Q6 453 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 WBP2Q969T9 261 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 SLC39A13Q96H72 371 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 CNBD2Q96M20 576 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 IL1RAPL1Q9NZN1 696 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 STK39Q9UEW8 545 aa11.83□□□□□ -0.52
TNFAIP1-201ENST00000226225 CDH23Q9H251 3354 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 CAPN8A6NHC0 703 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 MAGEB3O15480 346 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 RENBPP51606 427 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 WASHC5Q12768 1159 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 MAP7Q14244 749 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 POU6F1Q14863 301 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 TNS4Q8IZW8 715 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 NAT8LQ8N9F0 302 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 SH3RF2Q8TEC5 729 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 WDR83Q9BRX9 315 aaKnown RBP11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 TTLL2Q9BWV7 592 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 SLC24A2Q9UI40 661 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 GOLGA8TH3BQL2 631 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 DNAJC6O75061 913 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 GCATO75600 419 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 IGLV3-25P01717 112 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 IGFBP4P22692 258 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 SLC6A4P31645 630 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 SLC10A7Q0GE19 358 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 VWA5B1Q5TIE3 1220 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 TIGD7Q6NT04 549 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 RBM44Q6ZP01 1051 aaKnown RBP11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 RNF168Q8IYW5 571 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 DCAKDQ8WVC6 231 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 E2F7Q96AV8 911 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 ERLEC1Q96DZ1 483 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 MYEOVQ96EZ4 313 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 FICDQ9BVA6 458 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 CHCHD3Q9NX63 227 aaKnown RBP11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 HEMK1Q9Y5R4 338 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 ACTL7AQ9Y615 435 aa11.82□□□□□ -0.52
TNFAIP1-201ENST00000226225 IQANK1A0A1B0GTG1 560 aa11.81□□□□□ -0.52
TNFAIP1-201ENST00000226225 TCRBV9S1A1TA0A576 114 aa11.81□□□□□ -0.52
TNFAIP1-201ENST00000226225 CHADO15335 359 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms