RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 TAPT1Q6NXT6 567 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 SLC27A1Q6PCB7 646 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 ARMCX2Q7L311 632 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 CATSPER4Q7RTX7 472 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 CUZD1Q86UP6 607 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 CLVS1Q8IUQ0 354 aaPredicted RBP12.5□□□□□ -0.41
NUP88-201ENST00000225696 SIX6OS1Q8N1H7 587 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 CBR4Q8N4T8 237 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 FNDC8Q8TC99 324 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 UHRF1Q96T88 793 aaPredicted RBP12.5□□□□□ -0.41
NUP88-201ENST00000225696 HNRNPABQ99729 332 aaKnown RBP12.5□□□□□ -0.41
NUP88-201ENST00000225696 ADAMTS10Q9H324 1103 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 TUT1Q9H6E5 874 aaKnown RBP12.5□□□□□ -0.41
NUP88-201ENST00000225696 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 OR12D3Q9UGF7 316 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 STAP1Q9ULZ2 295 aa12.5□□□□□ -0.41
NUP88-201ENST00000225696 ERI2A8K979 691 aaKnown RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 A8MT66 165 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 H0YJX3 145 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 PPP6CO00743 305 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ALDOCP09972 364 aaKnown RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 CHRM3P20309 590 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 HADHAP40939 763 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 CLCN2P51788 898 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 STX5Q13190 355 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 GRIK4Q16099 956 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ADRM1Q16186 407 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 WSCD1Q658N2 575 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 C8orf82Q6P1X6 216 aaPredicted RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 PIWIL4Q7Z3Z4 852 aaKnown RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 ZNF786Q8N393 782 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 KLHL23Q8NBE8 558 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ARRDC4Q8NCT1 418 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ANKRD49Q8WVL7 239 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ISOC1Q96CN7 298 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 MRPL57Q9BQC6 102 aaKnown RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 COLEC11Q9BWP8 271 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 MEAF6Q9HAF1 191 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 CLK4Q9HAZ1 481 aaKnown RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 ARHGEF38Q9NXL2 777 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 TRHDEQ9UKU6 1024 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 DERAQ9Y315 318 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 FZD9O00144 591 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ATE1O95260 518 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
NUP88-201ENST00000225696 SNRPB2P08579 225 aaKnown RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 COL6A2P12110 1019 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ATP5F1P24539 256 aaPredicted RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 LRPAP1P30533 357 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 SOX11P35716 441 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 PRKAA2P54646 552 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 LILRA4P59901 499 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 C16orf72Q14CZ0 275 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 DCAF4L1Q3SXM0 396 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 NAPEPLDQ6IQ20 393 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 PPP4R4Q6NUP7 873 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 LIMS2Q7Z4I7 341 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 ZBTB46Q86UZ6 589 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 SPPL2CQ8IUH8 684 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 CNTN4Q8IWV2 1026 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 BBS5Q8N3I7 341 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 LZTR1Q8N653 840 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 TMEM40Q8WWA1 233 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 C12orf43Q96C57 262 aaKnown RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 TKTL2Q9H0I9 626 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 GDAP2Q9NXN4 497 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 THEGQ9P2T0 379 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
NUP88-201ENST00000225696 AURKCQ9UQB9 309 aa12.49□□□□□ -0.41
NUP88-201ENST00000225696 FAM155AB1AL88 458 aaPredicted RBP12.48□□□□□ -0.41
NUP88-201ENST00000225696 DFFAO00273 331 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 CCL22O00626 93 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 NME4O00746 187 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 NRP2O60462 931 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 CYP2C9P11712 490 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 CD247P20963 164 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 OXTRP30559 389 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 SQLEQ14534 574 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 TECRLQ5HYJ1 363 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 PCID2Q5JVF3 399 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 CHST15Q7LFX5 561 aaPredicted RBP12.48□□□□□ -0.41
NUP88-201ENST00000225696 LDB1Q86U70 411 aaPredicted RBP12.48□□□□□ -0.41
NUP88-201ENST00000225696 DHFR2Q86XF0 187 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 ZMIZ2Q8NF64 920 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 STON2Q8WXE9 905 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 FBXL20Q96IG2 436 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 PLEKHG4BQ96PX9 1271 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 TBL1YQ9BQ87 522 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
NUP88-201ENST00000225696 CRTAC1Q9NQ79 661 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
NUP88-201ENST00000225696 MAP10Q9P2G4 905 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms