RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 DMAP1Q9NPF5 467 aaPredicted RBP25.14■■□□□ 1.61
RUNDC3A-201ENST00000225441 MRPL42Q9Y6G3 142 aaKnown RBP25.14■■□□□ 1.61
RUNDC3A-201ENST00000225441 EFEMP2O95967 443 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 AHSGP02765 367 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 SBK3P0C264 359 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 STMN1P16949 149 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 TPH1P17752 444 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 MPSTP25325 297 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 NRG1Q02297 640 aaPredicted RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 OGFRL1Q5TC84 451 aaPredicted RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 KIAA0930Q6ICG6 404 aaPredicted RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 PIWIL4Q7Z3Z4 852 aaKnown RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 HPS6Q86YV9 775 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 ST13P4Q8IZP2 240 aaPredicted RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 PGAM4Q8N0Y7 254 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 DQX1Q8TE96 717 aaKnown RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 DLG3Q92796 817 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 RNF34Q969K3 372 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 CCDC126Q96EE4 140 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 IGSF21Q96ID5 467 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 B3GALT6Q96L58 329 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 MRPL57Q9BQC6 102 aaKnown RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 MRPL40Q9NQ50 206 aaKnown RBP25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 ADAMTS6Q9UKP5 1117 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 TCAF1Q9Y4C2 921 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 VWA8A3KMH1 1905 aa25.13■■□□□ 1.61
RUNDC3A-201ENST00000225441 LAG3P18627 525 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 ADRA1AP35348 466 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 POU4F1Q01851 419 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 CTXN3Q4LDR2 81 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 ZNF280DQ6N043 979 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 BNC2Q6ZN30 1099 aaPredicted RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 RNF111Q6ZNA4 994 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 GALNT15Q8N3T1 639 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 MRPL46Q9H2W6 279 aaKnown RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 MAN1C1Q9NR34 630 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 CXXC1Q9P0U4 656 aaPredicted RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 CPSF2Q9P2I0 782 aaKnown RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 E2F8A0AVK6 867 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 H3BNX3 289 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 AP1G1O43747 822 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 GJB5O95377 273 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 ARCN1P48444 511 aaKnown RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 NSUN2Q08J23 767 aaKnown RBP eCLIP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 GRM2Q14416 872 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 RTP2Q5QGT7 225 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 TAS1R1Q7RTX1 841 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 MFN1Q8IWA4 741 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 DCP1BQ8IZD4 617 aaKnown RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 CENPLQ8N0S6 344 aaPredicted RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 FSTL5Q8N475 847 aaPredicted RBP25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 EDEM1Q92611 657 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 FATE1Q969F0 183 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 APOL2Q9BQE5 337 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 CENPKQ9BS16 269 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 EFCAB1Q9HAE3 211 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 TMEM30AQ9NV96 361 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 NEU3Q9UQ49 428 aa25.12■■□□□ 1.61
RUNDC3A-201ENST00000225441 OR6C75A6NL08 312 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 OR4Q2P0C623 313 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 GMPRP36959 345 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 SH3BGRP55822 239 aaPredicted RBP25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 ROR2Q01974 943 aaKnown RBP25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 MANEALQ5VSG8 457 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 GALNT7Q86SF2 657 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 SNX32Q86XE0 403 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 ARHGAP12Q8IWW6 846 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 SLC39A11Q8N1S5 342 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 AFAP1L2Q8N4X5 818 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 C2CD4AQ8NCU7 369 aaPredicted RBP25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 GPR78Q96P69 363 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 TTPALQ9BTX7 342 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 RHOBTB2Q9BYZ6 727 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 EBF3Q9H4W6 596 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 SLC24A3Q9HC58 644 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 PAPOLBQ9NRJ5 636 aaKnown RBP25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 ABCC13Q9NSE7 274 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 NCKIPSDQ9NZQ3 722 aa25.11■■□□□ 1.61
RUNDC3A-201ENST00000225441 FAM95CA0A1B0GW59 222 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 CARNS1A5YM72 827 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 TK2O00142 265 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 CHRNGP07510 517 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 UBTFL6P0CB48 400 aaPredicted RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 GABRB3P28472 473 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 PAPOLAP51003 745 aaKnown RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 NAGLUP54802 743 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 HTRA4P83105 476 aaPredicted RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 PPP2R5DQ14738 602 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 SMAD1Q15797 465 aaKnown RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 RNF220Q5VTB9 566 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 DENND5AQ6IQ26 1287 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 OTOP3Q7RTS5 596 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 RNF168Q8IYW5 571 aaPredicted RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 DSELQ8IZU8 1212 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 ACVR1CQ8NER5 493 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 CALML6Q8TD86 181 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 HERVK_113Q902F9 699 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 CCDC124Q96CT7 223 aaKnown RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 MAELQ96JY0 434 aaKnown RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 VN1R3Q9BXE9 311 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms