RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PROX1Q92786 737 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 RIPOR3Q96MK2 946 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 ACBD6Q9BR61 282 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 STXBP5LQ9Y2K9 1186 aa18.57■□□□□ 0.56
CLIP2-201ENST00000223398 TMEM191CA6NGB0 347 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 VPS4BO75351 444 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 C22orf31O95567 290 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 SHBGP04278 402 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 LYPLAL1Q5VWZ2 237 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 RNF44Q7L0R7 432 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 PPP1R14AQ96A00 147 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 SGTAO43765 313 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 PDE5AO76074 875 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 OR6A2O95222 327 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 NEK2P51955 445 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 MSLNQ13421 630 aaPredicted RBP18.56■□□□□ 0.56
CLIP2-201ENST00000223398 STRADAQ7RTN6 431 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 DHFR2Q86XF0 187 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 OR7D4Q8NG98 312 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 CSPG4P5Q96PW8 444 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 C11orf84Q9BUA3 381 aaPredicted RBP18.56■□□□□ 0.56
CLIP2-201ENST00000223398 NOD2Q9HC29 1040 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 GLOD4Q9HC38 313 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 MAT2AP31153 395 aaKnown RBP18.56■□□□□ 0.56
CLIP2-201ENST00000223398 RAB10P61026 200 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 GPM6BQ13491 265 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 ZNHIT3Q15649 155 aaPredicted RBP18.56■□□□□ 0.56
CLIP2-201ENST00000223398 RPL10LQ96L21 214 aaKnown RBP18.56■□□□□ 0.56
CLIP2-201ENST00000223398 ASB2Q96Q27 587 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 OSBPL6Q9BZF3 934 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 GTF2IRD1Q9UHL9 959 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 FBXO5Q9UKT4 447 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 LOC102724159A0A0B4J2E5 919 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 MFSD11O43934 449 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 RASGRP1O95267 797 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 PWP2Q15269 919 aaKnown RBP18.56■□□□□ 0.56
CLIP2-201ENST00000223398 ALKBH2Q6NS38 261 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 CLDND1Q9NY35 253 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 DUSP12Q9UNI6 340 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 FCF1Q9Y324 198 aaKnown RBP18.56■□□□□ 0.56
CLIP2-201ENST00000223398 PCDHGA4Q9Y5G9 962 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 RAI2Q9Y5P3 530 aa18.56■□□□□ 0.56
CLIP2-201ENST00000223398 ARVCFO00192 962 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 SCTRP47872 440 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 PHYKPLQ8IUZ5 450 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 PCDH20Q8N6Y1 951 aaKnown RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 CAB39LQ9H9S4 337 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 PER2O15055 1255 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 ARHGEF9O43307 516 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 ULK1O75385 1050 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 CYP3A5P20815 502 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 POLD2P49005 469 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 CBX2Q14781 532 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 FNBP1LQ5T0N5 605 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 ICE2Q659A1 982 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 RBFAQ8N0V3 343 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 OR4K2Q8NGD2 314 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 NPLOC4Q8TAT6 608 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 TMEM237Q96Q45 408 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 PRRG3Q9BZD7 231 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 IGKV6D-41A0A0C4DH26 115 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 QSOX1O00391 747 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 EOMESO95936 686 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 H2AFXP16104 143 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 NEK3P51956 506 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 CYP4Z2PQ8N1L4 340 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 TSEN2Q8NCE0 465 aaKnown RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 LINC00854A0A1B0GVQ3 168 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 ACSL4O60488 711 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 RPL38P63173 70 aaKnown RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 C12orf42Q96LP6 360 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 EBNA1BP2Q99848 306 aaKnown RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 PHPT1Q9NRX4 125 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 SLC38A8A6NNN8 435 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 GRIA4P48058 902 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 RGS1Q08116 209 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 MRPL28Q13084 256 aaKnown RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 GDF6Q6KF10 455 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 FAM180AQ6UWF9 173 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 FGD2Q7Z6J4 655 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 ZC3H7AQ8IWR0 971 aaKnown RBP18.55■□□□□ 0.56
CLIP2-201ENST00000223398 ZNF398Q8TD17 642 aa18.55■□□□□ 0.56
CLIP2-201ENST00000223398 ATG7O95352 703 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 LBPP18428 481 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 KELP23276 732 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 COPZ1P61923 177 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 SLC10A6Q3KNW5 377 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 PYROXD2Q8N2H3 581 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 KLHL23Q8NBE8 558 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 FAIM2Q9BWQ8 316 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 RHOBTB2Q9BYZ6 727 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 FSBPO95073 299 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 VAV1P15498 845 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 PSMC3P17980 439 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 MMP8P22894 467 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 PTPN4P29074 926 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 HSPA13P48723 471 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 PKNOX1P55347 436 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms