RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 PLPP6Q8IY26 295 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 TAB3Q8N5C8 712 aaPredicted RBP16.59■□□□□ 0.25
LIM2-201ENST00000221973 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 GRIN3AQ8TCU5 1115 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 GRK7Q8WTQ7 553 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 HMGB4Q8WW32 186 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 OR8D1Q8WZ84 308 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 NUDCD1Q96RS6 583 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 CARD6Q9BX69 1037 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 ZDHHC6Q9H6R6 413 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 NOD2Q9HC29 1040 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 POLMQ9NP87 494 aaPredicted RBP16.59■□□□□ 0.25
LIM2-201ENST00000221973 TMEM74BQ9NUR3 256 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 RSPH14Q9UHP6 348 aa16.59■□□□□ 0.25
LIM2-201ENST00000221973 FEZ2Q9UHY8 353 aaPredicted RBP16.59■□□□□ 0.25
LIM2-201ENST00000221973 ASCC3Q8N3C0 2202 aaKnown RBP16.58■□□□□ 0.25
LIM2-201ENST00000221973 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 KHNYNO15037 678 aaKnown RBP16.58■□□□□ 0.24
LIM2-201ENST00000221973 ECEL1O95672 775 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 POP4O95707 220 aaKnown RBP16.58■□□□□ 0.24
LIM2-201ENST00000221973 GABRG2P18507 467 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 CR2P20023 1033 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 ACTN2P35609 894 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 CSNK1DP48730 415 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 DHPSP49366 369 aaPredicted RBP16.58■□□□□ 0.24
LIM2-201ENST00000221973 P3H1Q32P28 736 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 ARSIQ5FYB1 569 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 ITPRIPL1Q6GPH6 555 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 PSAPL1Q6NUJ1 521 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 TMEFF1Q8IYR6 380 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 CEP112Q8N8E3 955 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 ARRDC2Q8TBH0 407 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 PIGKQ92643 395 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 NSMCE3Q96MG7 304 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 RUNDC3BQ96NL0 473 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 FAM129BQ96TA1 746 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 HEPHQ9BQS7 1158 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 GBA3Q9H227 469 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 IL36AQ9UHA7 158 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 PCYOX1Q9UHG3 505 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 ANGPTL2Q9UKU9 493 aa16.58■□□□□ 0.24
LIM2-201ENST00000221973 MUC22E2RYF6 1773 aaPredicted RBP16.58■□□□□ 0.24
LIM2-201ENST00000221973 PI4KAP42356 2102 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 CTAGE15A4D2H0 777 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 GAS8O95995 478 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 KRT14P02533 472 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 CTAGE8P0CG41 777 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 PSMB4P28070 264 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 RPL22P35268 128 aaKnown RBP16.57■□□□□ 0.24
LIM2-201ENST00000221973 CD86P42081 329 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 PTGIRP43119 386 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 VPS41P49754 854 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 AP1S1P61966 158 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 MRPS25P82663 173 aaKnown RBP16.57■□□□□ 0.24
LIM2-201ENST00000221973 DR1Q01658 176 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 RAD51Q06609 339 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 ELAVL3Q14576 367 aaKnown RBP16.57■□□□□ 0.24
LIM2-201ENST00000221973 PPP1R7Q15435 360 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 FAXCQ5TGI0 409 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 ALG1LQ6GMV1 187 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 NCEH1Q6PIU2 408 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 CTAGE6Q86UF2 777 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 CACUL1Q86Y37 369 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 CTAGE4Q8IX94 777 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 OR2T3Q8NH03 318 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 SPATA22Q8NHS9 363 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 RBM15Q96T37 977 aaKnown RBP eCLIP16.57■□□□□ 0.24
LIM2-201ENST00000221973 SLC25A51Q9H1U9 297 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 SLC6A17Q9H1V8 727 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 PAK5Q9P286 719 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 WASF3Q9UPY6 502 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 WASF2Q9Y6W5 498 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 CHD6Q8TD26 2715 aa16.57■□□□□ 0.24
LIM2-201ENST00000221973 TTI1O43156 1089 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 LEFTY1O75610 366 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 PIGNO95427 931 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 METTL18O95568 372 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 IL1BP01584 269 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 CTSLP07711 333 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 MMP2P08253 660 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 PSMD8P48556 350 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 COPAP53621 1224 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 IHHQ14623 411 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 PARP6Q2NL67 630 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 POM121L1PQ3SYA9 428 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 PEAR1Q5VY43 1037 aaPredicted RBP16.56■□□□□ 0.24
LIM2-201ENST00000221973 ARMCX6Q7L4S7 300 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 LPCAT2Q7L5N7 544 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 DSG4Q86SJ6 1040 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 PRPF39Q86UA1 669 aaKnown RBP16.56■□□□□ 0.24
LIM2-201ENST00000221973 CAMK1DQ8IU85 385 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 MMAAQ8IVH4 418 aaKnown RBP16.56■□□□□ 0.24
LIM2-201ENST00000221973 IMP4Q96G21 291 aaKnown RBP16.56■□□□□ 0.24
LIM2-201ENST00000221973 FCRL5Q96RD9 977 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 MKRN2Q9H000 416 aaKnown RBP16.56■□□□□ 0.24
LIM2-201ENST00000221973 RSPH9Q9H1X1 276 aaPredicted RBP16.56■□□□□ 0.24
LIM2-201ENST00000221973 L2HGDHQ9H9P8 463 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 PCDH9Q9HC56 1237 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 TMEM9BQ9NQ34 198 aa16.56■□□□□ 0.24
LIM2-201ENST00000221973 UBP1Q9NZI7 540 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms