RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 SPAG4Q9NPE6 437 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 CNOT6Q9ULM6 557 aaKnown RBP18.65■□□□□ 0.58
CACTIN-201ENST00000221899 AAR2Q9Y312 384 aaKnown RBP18.65■□□□□ 0.58
CACTIN-201ENST00000221899 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.65■□□□□ 0.58
CACTIN-201ENST00000221899 SCN4AP35499 1836 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 SNX17Q15036 470 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 BTBD8Q5XKL5 378 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 ATPAF2Q8N5M1 289 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 FSD1LQ9BXM9 530 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 CNOT11Q9UKZ1 510 aaKnown RBP18.65■□□□□ 0.58
CACTIN-201ENST00000221899 MTF2Q9Y483 593 aaPredicted RBP18.65■□□□□ 0.58
CACTIN-201ENST00000221899 TCAF1Q9Y4C2 921 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 DNAH12Q6ZR08 3092 aa18.65■□□□□ 0.58
CACTIN-201ENST00000221899 SQLEQ14534 574 aa18.64■□□□□ 0.58
CACTIN-201ENST00000221899 C6orf10Q5SRN2 563 aa18.64■□□□□ 0.58
CACTIN-201ENST00000221899 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.58
CACTIN-201ENST00000221899 SENP8Q96LD8 212 aa18.64■□□□□ 0.58
CACTIN-201ENST00000221899 CNGB3Q9NQW8 809 aa18.64■□□□□ 0.58
CACTIN-201ENST00000221899 ARHGEF38Q9NXL2 777 aa18.64■□□□□ 0.58
CACTIN-201ENST00000221899 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.58
CACTIN-201ENST00000221899 MYLKQ15746 1914 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 PTGESO14684 152 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 H6PDO95479 791 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 GALK1P51570 392 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 SLC7A2P52569 658 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 CHSY3Q70JA7 882 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 DIS3LQ8TF46 1054 aaKnown RBP18.64■□□□□ 0.57
CACTIN-201ENST00000221899 GLOD4Q9HC38 313 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 RSL24D1Q9UHA3 163 aaKnown RBP18.64■□□□□ 0.57
CACTIN-201ENST00000221899 PFDN1O60925 122 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 SNRPB2P08579 225 aaKnown RBP18.64■□□□□ 0.57
CACTIN-201ENST00000221899 CCDC166P0CW27 439 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 LRPAP1P30533 357 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 CXCR3P49682 368 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.57
CACTIN-201ENST00000221899 NDST2P52849 883 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 TXNL4AP83876 142 aaKnown RBP18.64■□□□□ 0.57
CACTIN-201ENST00000221899 TECRLQ5HYJ1 363 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 LDB1Q86U70 411 aaPredicted RBP18.64■□□□□ 0.57
CACTIN-201ENST00000221899 CARM1Q86X55 608 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 C2CD4AQ8NCU7 369 aaPredicted RBP18.64■□□□□ 0.57
CACTIN-201ENST00000221899 LRCH3Q96II8 777 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 HAUS8Q9BT25 410 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 OSBPL11Q9BXB4 747 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 MEAF6Q9HAF1 191 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 NDFIP2Q9NV92 336 aa18.64■□□□□ 0.57
CACTIN-201ENST00000221899 PDCD11Q14690 1871 aaKnown RBP18.63■□□□□ 0.57
CACTIN-201ENST00000221899 A0A087X1B8 175 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 SAC3D1A6NKF1 404 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 C9JVG2 144 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 AP3B1O00203 1094 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 GABRDO14764 452 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 AKAP10O43572 662 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 GRIA3P42263 894 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 MYBPC3Q14896 1274 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 BHLHA9Q7RTU4 235 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 GAB3Q8WWW8 586 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 OLAHQ9NV23 265 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 LMCD1Q9NZU5 365 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 SFMBT1Q9UHJ3 866 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 RBM47A0AV96 593 aaKnown RBP18.63■□□□□ 0.57
CACTIN-201ENST00000221899 CCL22O00626 93 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 ZNF189O75820 626 aaPredicted RBP18.63■□□□□ 0.57
CACTIN-201ENST00000221899 SRP72O76094 671 aaKnown RBP18.63■□□□□ 0.57
CACTIN-201ENST00000221899 IPO13O94829 963 aaKnown RBP18.63■□□□□ 0.57
CACTIN-201ENST00000221899 HLA-DQB2P05538 268 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 ZNF23P17027 643 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 CREB5Q02930 508 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 MAPRE2Q15555 327 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 FAM83EQ2M2I3 478 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 TWF2Q6IBS0 349 aaKnown RBP18.63■□□□□ 0.57
CACTIN-201ENST00000221899 NEPROQ6NW34 567 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 ZBTB49Q6ZSB9 765 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 LPCAT2Q7L5N7 544 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 ANKRD49Q8WVL7 239 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 CANT1Q8WVQ1 401 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 EXT2Q93063 718 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 RMND5BQ96G75 393 aaPredicted RBP18.63■□□□□ 0.57
CACTIN-201ENST00000221899 GIMAP2Q9UG22 337 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 CROTQ9UKG9 612 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 PADI4Q9UM07 663 aa18.63■□□□□ 0.57
CACTIN-201ENST00000221899 A0A0J9YVX5 310 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 RRN3P2A6NIE6 340 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 SOCS2O14508 198 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 UBFD1O14562 309 aaKnown RBP18.62■□□□□ 0.57
CACTIN-201ENST00000221899 DYNC1LI2O43237 492 aaPredicted RBP18.62■□□□□ 0.57
CACTIN-201ENST00000221899 PSMD3O43242 534 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 HTRA2O43464 458 aaPredicted RBP18.62■□□□□ 0.57
CACTIN-201ENST00000221899 ANXA9O76027 345 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 UGT1A6P19224 532 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 SLC7A1P30825 629 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 DNAJB13P59910 316 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 PPIL2Q13356 520 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 DUSP28Q4G0W2 176 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 XKR4Q5GH76 650 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 KLC3Q6P597 504 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 BORAQ6PGQ7 559 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 DCLRE1AQ6PJP8 1040 aa18.62■□□□□ 0.57
CACTIN-201ENST00000221899 FASTKD5Q7L8L6 764 aaKnown RBP18.62■□□□□ 0.57
CACTIN-201ENST00000221899 FAM47BQ8NA70 645 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms