RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 CPEB1Q9BZB8 566 aaKnown RBP22.35■■□□□ 1.17
VTI1B-201ENST00000216456 SUV39H2Q9H5I1 410 aa22.35■■□□□ 1.17
VTI1B-201ENST00000216456 SMG1Q96Q15 3661 aaKnown RBP22.35■■□□□ 1.17
VTI1B-201ENST00000216456 A0A087WV48 116 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 DFFAO00273 331 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 LRCH4O75427 683 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 ALPPL2P10696 532 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 PRKCIP41743 596 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 NDST2P52849 883 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 NR1I3Q14994 352 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 SMTNL2Q2TAL5 461 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 WSCD2Q2TBF2 565 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 TMEM52BQ4KMG9 183 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 CDCP2Q5VXM1 449 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 AFMIDQ63HM1 303 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 TXNRD3NBQ6F5E7 133 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 PHACTR4Q8IZ21 702 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 IFI44Q8TCB0 444 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 ARHGEF26Q96DR7 871 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 LRRC61Q9BV99 259 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 NRSN2Q9GZP1 204 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 CLPBQ9H078 707 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 SCUBE2Q9NQ36 999 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 ETNK2Q9NVF9 386 aa22.34■■□□□ 1.17
VTI1B-201ENST00000216456 CWC15Q9P013 229 aaKnown RBP22.34■■□□□ 1.17
VTI1B-201ENST00000216456 APOBEC3BQ9UH17 382 aaKnown RBP22.34■■□□□ 1.17
VTI1B-201ENST00000216456 IGSF10Q6WRI0 2623 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 A0A1W2PQC6 194 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 CPED1A4D0V7 1026 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 NEMP2A6NFY4 417 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 DAPK3O43293 454 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 C6P13671 934 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 TGM2P21980 687 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 XPAP23025 273 aaPredicted RBP22.33■■□□□ 1.17
VTI1B-201ENST00000216456 EIF4A3P38919 411 aaKnown RBP22.33■■□□□ 1.17
VTI1B-201ENST00000216456 EIF2S3P41091 472 aaKnown RBP22.33■■□□□ 1.17
VTI1B-201ENST00000216456 THOP1P52888 689 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 ADKP55263 362 aaKnown RBP22.33■■□□□ 1.17
VTI1B-201ENST00000216456 E2F1Q01094 437 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 COL9A2Q14055 689 aaPredicted RBP22.33■■□□□ 1.17
VTI1B-201ENST00000216456 UGP2Q16851 508 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 FILIP1LQ4L180 1135 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 SOWAHCQ53LP3 525 aaPredicted RBP22.33■■□□□ 1.17
VTI1B-201ENST00000216456 PRRT3Q5FWE3 981 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 FAM181AQ8N9Y4 354 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 FUBP1Q96AE4 644 aaKnown RBP22.33■■□□□ 1.17
VTI1B-201ENST00000216456 BTBD6Q96KE9 485 aa22.33■■□□□ 1.17
VTI1B-201ENST00000216456 LRRK1Q38SD2 2015 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 TSPAN11A1L157 253 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 ARHGAP42A6NI28 874 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 A8MX80 341 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 H3BM21 787 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 PRPSAP2O60256 369 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 PALMO75781 387 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 MPOP05164 745 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 LIG3P49916 1009 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 PERM1Q5SV97 790 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 HGSNATQ68CP4 663 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 EFL1Q7Z2Z2 1120 aaKnown RBP22.32■■□□□ 1.16
VTI1B-201ENST00000216456 SRLQ86TD4 932 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 LUZP1Q86V48 1076 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 TSACCQ96A04 125 aaPredicted RBP22.32■■□□□ 1.16
VTI1B-201ENST00000216456 OR1A2Q9Y585 309 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 RAI2Q9Y5P3 530 aa22.32■■□□□ 1.16
VTI1B-201ENST00000216456 ASXL3Q9C0F0 2248 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 SYCE3A1L190 88 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 RIOK3O14730 519 aaKnown RBP22.31■■□□□ 1.16
VTI1B-201ENST00000216456 SERPINC1P01008 464 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 GZMAP12544 262 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 TSHRP16473 764 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 DPYSQ14117 519 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 FAXCQ5TGI0 409 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 ZCCHC8Q6NZY4 707 aaKnown RBP22.31■■□□□ 1.16
VTI1B-201ENST00000216456 ZSCAN30Q86W11 494 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 SLC35F3Q8IY50 421 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 PLA2G15Q8NCC3 412 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 MAPK15Q8TD08 544 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 DUSP23Q9BVJ7 150 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 SP110Q9HB58 689 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 CBX8Q9HC52 389 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 CSNK1G3Q9Y6M4 447 aa22.31■■□□□ 1.16
VTI1B-201ENST00000216456 A0A1W2PNU3 283 aaPredicted RBP22.3■■□□□ 1.16
VTI1B-201ENST00000216456 PMS2P1A4D2B8 440 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 CSO75390 466 aaKnown RBP22.3■■□□□ 1.16
VTI1B-201ENST00000216456 RNF8O76064 485 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 PCCBP05166 539 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 DESP17661 470 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 AMPD1P23109 780 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 HTR7P34969 479 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 MMP12P39900 470 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 SLC10A7Q0GE19 358 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 RALGDSQ12967 914 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 INPP5AQ14642 412 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 LRRC14Q15048 493 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 MACC1Q6ZN28 852 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 RD3Q7Z3Z2 195 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 CPNE8Q86YQ8 564 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 FNIP1Q8TF40 1166 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 HSPH1Q92598 858 aa22.3■■□□□ 1.16
VTI1B-201ENST00000216456 IL12RB2Q99665 862 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms