RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 LOC285095A0A1B0GVY8 99 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 MROH6A6NGR9 719 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 E9PBE3 544 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 SCAMP3O14828 347 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 LDB2O43679 373 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 KLHL41O60662 606 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 H2AFYO75367 372 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 KLKB1P03952 638 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 HMGA1P17096 107 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 AOC1P19801 751 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 CRABP2P29373 138 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 PGM1P36871 562 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 SLC11A2P49281 568 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 PRMT2P55345 433 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 GNA12Q03113 381 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 TNK2Q07912 1038 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 PLD1Q13393 1074 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 CSHL1Q14406 222 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 HECTD3Q5T447 861 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 ACBD5Q5T8D3 534 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 KIAA0408Q6ZU52 694 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 CILP2Q8IUL8 1156 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 HEXDCQ8WVB3 486 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 FAM96AQ9H5X1 160 aa8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 NOP53Q9NZM5 478 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 MARCH4Q9P2E8 410 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-201ENST00000216106 ANAPC1Q9H1A4 1944 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TARM1B6A8C7 271 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 DLX3O60479 287 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 PIGNO95427 931 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 EFEMP2O95967 443 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 COL6A2P12110 1019 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 CORO1AP31146 461 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 GTF2A1P52655 376 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 POU4F1Q01851 419 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 KPNB1Q14974 876 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TBCCQ15814 346 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TRIM60Q495X7 471 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 ARL13AQ5H913 290 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 WASHC2DQ5SRD0 308 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TMPRSS6Q8IU80 811 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 KCNV2Q8TDN2 545 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 FAM161BQ96MY7 647 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 ILKAPQ9H0C8 392 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 EBF2Q9HAK2 575 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 MTF2Q9Y483 593 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 GOLGA8QA0A0J9YX86 632 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 GOLGA8OA6NCC3 632 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 C2orf78A6NCI8 922 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 GOLGA8NF8WBI6 632 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 NEMP1O14524 444 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TSPAN3O60637 253 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 STC2O76061 302 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 PAPSS2O95340 614 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 RGRP47804 291 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 LEPRP48357 1165 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 POLD2P49005 469 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TLE2Q04725 743 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TAF12Q16514 161 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 KHDC1Q4VXA5 237 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TMC7Q7Z402 723 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 LCA5Q86VQ0 697 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 RNF168Q8IYW5 571 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 PDZD8Q8NEN9 1154 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 WDR60Q8WVS4 1066 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 WBP2Q969T9 261 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 CLPTM1LQ96KA5 538 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 DNAJC1Q96KC8 554 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TBATAQ96M53 351 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 DRC3Q9H069 523 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 COL4A6Q14031 1691 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 ANKRD36A6QL64 1941 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 A0A087X1B8 175 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 NEMP2A6NFY4 417 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 VGLL3A8MV65 326 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 DCXO43602 365 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 SERPINF2P08697 491 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 EPGNQ6UW88 154 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 C16orf59Q7L2K0 433 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 CCNYL1Q8N7R7 359 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 TXNDC5Q8NBS9 432 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 OR13C4Q8NGS5 318 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 ZNF461Q8TAF7 563 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 OR52B2Q96RD2 323 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 MAGEH1Q9H213 219 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 MRPL46Q9H2W6 279 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 SMPD4Q9NXE4 827 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 AFF4Q9UHB7 1163 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 ZDHHC2Q9UIJ5 367 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 OGDHLQ9ULD0 1010 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 SORCS3Q9UPU3 1222 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 CRYL1Q9Y2S2 319 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 BACE2Q9Y5Z0 518 aa8.03□□□□□ -1.12
HMGXB4-201ENST00000216106 H3BNC9 293 aa8.02□□□□□ -1.12
HMGXB4-201ENST00000216106 SLC7A4O43246 635 aa8.02□□□□□ -1.12
HMGXB4-201ENST00000216106 TPBGLP0DKB5 382 aa8.02□□□□□ -1.12
HMGXB4-201ENST00000216106 CCL5P13501 91 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms