RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DUX4L6P0CJ89 424 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 DUX4L7P0CJ90 424 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 SPATA31C1P0DKV0 1188 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 NOS2P35228 1153 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 MTAPQ13126 283 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TARBP2Q15633 366 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 SVOPQ8N4V2 548 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 DUX4Q9UBX2 424 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TPST2O60704 377 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 RAB10P61026 200 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 CYP4F8P98187 520 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 MAD2L1Q13257 205 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 MED22Q15528 200 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 IQSEC1Q6DN90 963 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 RETSATQ6NUM9 610 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM45AQ8TCE6 357 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC25A23Q9BV35 468 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 IL22Q9GZX6 179 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC17A6Q9P2U8 582 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 BCLAF3A2AJT9 711 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM25EA8MYX2 175 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 WASP42768 502 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 RNF220Q5VTB9 566 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 PGM2Q96G03 612 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 GRIN3BO60391 1043 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 ITGA3P26006 1051 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 BUD31P41223 144 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 NFE2Q16621 373 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 HLA-DQA1Q5Y7H0 255 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 USP45Q70EL2 814 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 IRF2BP2Q7Z5L9 587 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM156AQ8NDB6 213 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 FERD3LQ96RJ6 166 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 PRDM4Q9UKN5 801 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM47E-STBD1D6RA91 191 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 RBBP4Q09028 425 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 PSMD5Q16401 504 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 PITRM1Q5JRX3 1037 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 KIAA1324Q6UXG2 1013 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 TERB1Q8NA31 727 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 EPS8L2Q9H6S3 715 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 ABCB9Q9NP78 766 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 TMLHEQ9NVH6 421 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 UBAP1Q9NZ09 502 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 ENTPD4Q9Y227 616 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 MC4RP32245 332 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 ATG10Q9H0Y0 220 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 KLF15Q9UIH9 416 aa13.69□□□□□ -0.22
TGFBR3-201ENST00000212355 TMEM191CA6NGB0 347 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 C9IYK1 514 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 GJA9P57773 515 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 MAPKAPK3Q16644 382 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 DUPD1Q68J44 220 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 CPNE8Q86YQ8 564 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 ARL10Q8N8L6 244 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 ZFRQ96KR1 1074 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.228e-7■■■■□ 22
TGFBR3-201ENST00000212355 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 RRN3Q9NYV6 651 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 ENPP3O14638 875 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 CHRM5P08912 532 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 CCT3P49368 545 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC1A5Q15758 541 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 ZDHHC17Q8IUH5 632 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 HTRA1Q92743 480 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 DPEP3Q9H4B8 488 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 SPAG4Q9NPE6 437 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 MCUBQ9NWR8 336 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 AHSPQ9NZD4 102 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 A0A1W2PQH9 124 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 ATP5C1P36542 298 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 GPR1P46091 355 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC26A2P50443 739 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 DHDDSQ86SQ9 333 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 KAT2AQ92830 837 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 IQGAP1P46940 1657 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 LIN7AO14910 233 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 SIN3BO75182 1162 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 KHDRBS3O75525 346 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 TCEA3O75764 348 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 FGRP09769 529 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 DGKAP23743 735 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 ARRDC4Q8NCT1 418 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 OR7A2PQ8NGA2 310 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 LRRC4CQ9HCJ2 640 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 MTF2Q9Y483 593 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 GSAPA4D1B5 854 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 RPL4P36578 427 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 NOMO3P69849 1222 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms