RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 KCNK18Q7Z418 384 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 FAM131BQ86XD5 332 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 UBE2J2Q8N2K1 259 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 Q96MT0 163 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 WDR55Q9H6Y2 383 aaPredicted RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 LIN28AQ9H9Z2 209 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 LRRC4CQ9HCJ2 640 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TBC1D13Q9NVG8 400 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 MORF4L1Q9UBU8 362 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 FAM172BPA6NC97 362 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 URODP06132 367 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 THP07101 528 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CLTBP09497 229 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CHRM1P11229 460 aaPredicted RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 CLCN3P51790 818 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 MAZP56270 477 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 ACTR3P61158 418 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CYP24A1Q07973 514 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 BST2Q10589 180 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CYP4X1Q8N118 509 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TMCO6Q96DC7 493 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 NODALQ96S42 347 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 SLITRK2Q9H156 845 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 AGO4Q9HCK5 861 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 GPRC5CQ9NQ84 441 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 MCUBQ9NWR8 336 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 SH3BP4Q9P0V3 963 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 DNAJB4Q9UDY4 337 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 POMPQ9Y244 141 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 FBP2O00757 339 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 NCAM2O15394 837 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 NDUFS2O75306 463 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ARP10275 920 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TGFB3P10600 412 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TGFBR2P37173 567 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ATN1P54259 1190 aaPredicted RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 NFE2Q16621 373 aaPredicted RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 ZNF829Q3KNS6 432 aaPredicted RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 ZBED5Q49AG3 693 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 FAAH2Q6GMR7 532 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ZNF613Q6PF04 617 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ACOT1Q86TX2 421 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 FAM83AQ86UY5 434 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 PALB2Q86YC2 1186 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 C7orf26Q96N11 449 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 MAGEE1Q9HCI5 957 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 EXD2Q9NVH0 621 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TCRBV9S1A1TA0A576 114 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 OR6C70A6NIJ9 312 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 AIREO43918 545 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 RNASEH1O60930 286 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 OR6B1O95007 311 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 C9P02748 559 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CCNB1P14635 433 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ITGALP20701 1170 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CRADDP78560 199 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 FAM187BQ17R55 369 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 GCNT7Q6ZNI0 430 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 SLC22A16Q86VW1 577 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 C10orf53Q8N6V4 93 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 HM13Q8TCT9 377 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 SLC47A1Q96FL8 570 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 PNMA5Q96PV4 448 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ADI1Q9BV57 179 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TDRD1Q9BXT4 1180 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 SEMA4BQ9NPR2 832 aaPredicted RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 ZMYM5Q9UJ78 669 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ILVBLA1L0T0 632 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 F8VP50 259 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 IFRD1O00458 451 aaPredicted RBP10.5□□□□□ -0.73
VCL-201ENST00000211998 FSCN2O14926 492 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 UGT2B11O75310 529 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CYP1A2P05177 515 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 KLRK1P26718 216 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CYP4F8P98187 520 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 SYCE2Q6PIF2 218 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 IL27RAQ6UWB1 636 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 GALNT12Q8IXK2 581 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 PGAM4Q8N0Y7 254 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 PNPT1Q8TCS8 783 aaKnown RBP10.5□□□□□ -0.73
VCL-201ENST00000211998 RIOX1Q9H6W3 641 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 NMRK2Q9NPI5 230 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CISHQ9NSE2 258 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 DNAJC11Q9NVH1 559 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 PLLPQ9Y342 182 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 IL1R1P14778 569 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ENTPD1P49961 510 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 DEFA5Q01523 94 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CBWD6Q4V339 395 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CBWD3Q5JTY5 395 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CBWD5Q5RIA9 395 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ARMC8Q8IUR7 673 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 FBXL16Q8N461 479 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 MCOLN3Q8TDD5 553 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ALG3Q92685 438 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ZC3H10Q96K80 434 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms