RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MILR1Q7Z6M3 343 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 GDPD5Q8WTR4 605 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 LRRC39Q96DD0 335 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 VPS50Q96JG6 964 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 DNMT3LQ9UJW3 386 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 CPQQ9Y646 472 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 MTMR11A4FU01 709 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 PSMD3O43242 534 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 PGM3O95394 542 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 NNMTP40261 264 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 PGFP49763 221 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 SLC10A2Q12908 348 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 OTUD3Q5T2D3 398 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 TMEM198Q66K66 360 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 RHBDF2Q6PJF5 856 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 CDHR3Q6ZTQ4 885 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 STRADAQ7RTN6 431 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 DNAJB7Q7Z6W7 309 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 CLEC4FQ8N1N0 589 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 ARHGAP18Q8N392 663 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 SEC14L1Q92503 715 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 TMEM109Q9BVC6 243 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 KCNK4Q9NYG8 393 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 MRPS23Q9Y3D9 190 aaKnown RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 AGRPO00253 132 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 GSC2O15499 205 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 PEX11AO75192 247 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 RTN3O95197 1032 aaPredicted RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 IVDP26440 423 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 LRPAP1P30533 357 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 PHEXP78562 749 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 PQLC3Q8N755 202 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 BANPQ8N9N5 519 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 PRR11Q96HE9 360 aaPredicted RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ACOX2Q99424 681 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 TNKS2Q9H2K2 1166 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 LGALS13Q9UHV8 139 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 J3KR12 359 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 BTN3A1O00481 513 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 NCAM2O15394 837 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ITM2AO43736 263 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 IL10P22301 178 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ACVRL1P37023 503 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 SATB1Q01826 763 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 TRMT5Q32P41 509 aaKnown RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 LHX8Q68G74 356 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ULK2Q8IYT8 1036 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 KLHDC9Q8NEP7 349 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 MYLIPQ8WY64 445 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 NXNL1Q96CM4 212 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 NPAS2Q99743 824 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 SLC39A8Q9C0K1 460 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 COG4Q9H9E3 785 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ATAD5Q96QE3 1844 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 OR51F1A6NGY5 319 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 SLC38A8A6NNN8 435 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 CHRNGP07510 517 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ETS2P15036 469 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 CNTFP26441 200 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 PBLDP30039 288 aaPredicted RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 NTHL1P78549 312 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 FASTKQ14296 549 aaKnown RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ZBTB6Q15916 424 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 GPR158Q5T848 1215 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 PAQR9Q6ZVX9 377 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 ZNF786Q8N393 782 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 TRPC4APQ8TEL6 797 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 HMCESQ96FZ2 354 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 IL22Q9GZX6 179 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 EPB41L4BQ9H329 900 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 TAS2R1Q9NYW7 299 aa12.15□□□□□ -0.46
CHPF2-201ENST00000035307 HBS1LQ9Y450 684 aaKnown RBP12.15□□□□□ -0.46
CHPF2-201ENST00000035307 HACD1B0YJ81 288 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PRPF4O43172 522 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ESRRBO95718 433 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 SERPIND1P05546 499 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 CCR10P46092 362 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PTPRCAPQ14761 206 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ALFQ53S48 1182 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 FSTL4Q6MZW2 842 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF598Q86UK7 904 aaKnown RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 YAF2Q8IY57 180 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF781Q8N8C0 355 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 KLHL23Q8NBE8 558 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 TET1Q8NFU7 2136 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ZYG11BQ9C0D3 744 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 FZD10Q9ULW2 581 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 OR6C75A6NL08 312 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 MYO1GB0I1T2 1018 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF623O75123 536 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 RASSF9O75901 435 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 C1RP00736 705 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 MT-ND1P03886 318 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PYGLP06737 847 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 GSSP48637 474 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms